Mercurial > repos > sanbi-uwc > shapeit_phase
comparison shapeit_phase.xml @ 20:a5ef4f2c8124 draft
planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry commit 75ae96395b13aafb20f82b220c4d14ac484b6767-dirty
| author | sanbi-uwc |
|---|---|
| date | Tue, 18 Sep 2018 11:57:49 -0400 |
| parents | 42bafd3c5a83 |
| children | 394bd82a4c40 |
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| 19:42bafd3c5a83 | 20:a5ef4f2c8124 |
|---|---|
| 1 <tool id="shapeit_phase" name="shapeit_phase" version="0.18.0"> | 1 <tool id="shapeit_phase" name="shapeit_phase" version="0.19.0"> |
| 2 <description>genomic data with or without reference panel</description> | 2 <description>genomic data with or without reference panel</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="2.r837">shapeit</requirement> | 4 <requirement type="package" version="2.r837">shapeit</requirement> |
| 5 </requirements> | 5 </requirements> |
| 6 <stdio> | 6 <stdio> |
| 58 echo Processing NAME '${dat.name}' && | 58 echo Processing NAME '${dat.name}' && |
| 59 #end for | 59 #end for |
| 60 #end if | 60 #end if |
| 61 | 61 |
| 62 shapeit | 62 shapeit |
| 63 --thread \${GALAXY_SLOTS:-1} | |
| 63 | 64 |
| 64 #if $check_mode != "": | 65 #if $check_mode != "": |
| 65 -check | 66 -check |
| 66 #end if | 67 #end if |
| 67 | 68 |