# HG changeset patch
# User sanbi-uwc
# Date 1459758662 14400
# Node ID b00361fe3c520f7dabb222ea182fac574e34ac01
# Parent  dcd6ab7a3d8fbcf7725b2dc59dba267612479c4c
planemo upload for repository https://github.com/zipho/qualimap2 commit 158f2f649a448ee004e00cbed3a787753d7fbc0b

diff -r dcd6ab7a3d8f -r b00361fe3c52 qualimap_bamqc.xml
--- a/qualimap_bamqc.xml	Wed Mar 30 03:29:02 2016 -0400
+++ b/qualimap_bamqc.xml	Mon Apr 04 04:31:02 2016 -0400
@@ -14,7 +14,7 @@
             --out_genome_file ${genomecov_file}
             --out_dir ${genomecov_file.files_path}
             --out_pdf_file ${pdf_file}
-            --java-mem-size ${mem_size}
+            --java_mem_size ${mem_size}
     </command>
     <inputs>
         <param name="input_realigned_bam_file" type="data" format="bam" label="Realigned BAM dataset" help="Specify realigned BAM dataset"/>