Mercurial > repos > sanbi-uwc > qc

changeset 7:6bdec8c62aec draft default tip

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"planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc/tree/master/tools/qc commit 58ea5206cf78a4ff48fadedbe4e260c190d6f06e"
author sanbi-uwc
date Mon, 12 Apr 2021 15:53:58 +0000
parents 878f18249f76
children
files qc.py
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/qc.py	Mon Apr 12 12:28:41 2021 +0000
+++ b/qc.py	Mon Apr 12 15:53:58 2021 +0000
@@ -160,8 +160,8 @@
     
     # write a json file from the dict
     json_file = args.outfile + '.json'
-    with open(args.outfile, 'w') as jsonfile:
-       json.dump(qc_line, json_file)
+    with open(json_file, 'w') as jsonfile:
+       json.dump(qc_line, jsonfile)
     
     N_density = sliding_window_N_density(fasta)
     make_qc_plot(depth_pos, N_density, args.sample)