Mercurial > repos > sanbi-uwc > plink_datatypes

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planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit d0354c6155e1a44aab9c2fecf7a1a7f9e4bb22de
author sanbi-uwc
date Thu, 30 Aug 2018 07:41:55 -0400
parents 57bd7c6a72cd
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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1 ========================================================
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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2 Collection of Galaxy Datatypes for Population Genetics
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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3 ========================================================
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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5 That repository should be a starting point to collect all Population Genetics (PG)
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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6 file formats.
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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8 Development will happen in https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes. Feel free to contribute.
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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10 Copyright 2018 by:
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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12 * Ziphozakhe Mashologu
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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14 ============
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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15 Installation
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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16 ============
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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18 Please install these datatypes with the Galaxy Tool Shed:
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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20 ==================
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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21 Included Datatypes
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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22 ==================
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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24 - Bim
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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25 - Fam
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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27 (*)
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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29 =======
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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30 History
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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31 =======
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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33 ===============================
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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34 Wrapper Licence (MIT/BSD style)
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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35 ===============================
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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37 Permission to use, copy, modify, and distribute this software and its
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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38 documentation with or without modifications and for any purpose and
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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39 without fee is hereby granted, provided that any copyright notices
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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40 appear in all copies and that both those copyright notices and this
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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41 permission notice appear in supporting documentation, and that the
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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42 names of the contributors or copyright holders not be used in
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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43 advertising or publicity pertaining to distribution of the software
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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44 without specific prior permission.
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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46 THE CONTRIBUTORS AND COPYRIGHT HOLDERS OF THIS SOFTWARE DISCLAIM ALL
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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47 WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING ALL IMPLIED
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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48 WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL THE
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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49 CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY SPECIAL, INDIRECT
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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50 OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS
57bd7c6a72cd planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/tree/master/datatypes/plink_datatypes commit 2bf82b5426ec792b408104250a875585cbf7347f
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51 OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE
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52 OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE
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53 OR PERFORMANCE OF THIS SOFTWARE.
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54