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annotate README.rst @ 2:51f95fbef112 draft

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planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit c72e05aafb59b32b964f3c4ae15a051cd17bd9ee
author sanbi-uwc
date Mon, 27 Aug 2018 09:35:06 -0400
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0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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1 Plink
0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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2 ==============
0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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4 LINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner.
0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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5 The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data).
0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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6 Through integration with gPLINK and Haploview, there is some support for the subsequent visualization, annotation and storage of results.
0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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0a66d41464b4 planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry/galaxy-tools/plink commit d75648a99156867f43b45dc4cdb6fdb12bfc5de4
sanbi-uwc
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8 PLINK (one syllable) is being developed by Shaun Purcell whilst at the Center for Human Genetic Research (CHGR), Massachusetts General Hospital (MGH), and the Broad Institute of Harvard & MIT, with the support of others.