Mercurial > repos > sanbi-uwc > fasttree
annotate test-data/sample_aln1.fasta @ 0:614a12d56e58 draft default tip
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
| author | sanbi-uwc |
|---|---|
| date | Mon, 09 Jan 2017 08:07:45 -0500 |
| parents | |
| children |
| rev | line source |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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1 >484463 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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2 GATGAACGCTGACAGAATGCTTAACACATGCAAGTCT-TTGGCAAGGCGGACGGGTGAGTAACGCGTAAAGAACTTGCCCTGCAGACAGGGATAACAGACGGAAACGACTGACAACACCTGATACTGCGGGAGAGCTTTGCGTCCTATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCGATGATAGGTAGCCGGCCTGAGAGGGTGAACGGCCACAAGGGGACTGAGATACGGCCCTTACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATTCTGTGTGCACGATGAAGGTTTTCGGATTGTAAAGTGCTTTCAGCAGGGAAGCGGTACCTGCAGAAGAAGCGACGGCTAAA-TACGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTAGGCGGCCAGGCAAGTCTGGGGTGAAAACTTGCGGCTCAACCGCAAGCCTGCCCTGGAAACTGCCTGGCTAGAGTGCTGGAGAGGTGGACGGAACTGCACGAGTAGAGGTGAAATTCGTAGATATGTGCAGGAATGCCGATGATGAAGATAGTTCACTGGACGGCAACTGACGCTGAAGTGCGAAAGCTGGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCCAGCCGTAAACGATGATTACTGGGTGTGGGCCCGTGCCGAAGCAAATGCGATAAGTAATCCGCCTGGGGAGTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGACGCAACGCGAGGAACCTTACCAGATCTTGACATCCAGGTGGTGCATGGCTGTCGACAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCGCCAGTTGCGACTCTGGCGAGACTGCCTGCGAAGAGCAGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGATCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGCTGCGAAGCGGCAACGCCCAGCGAATCTTC-AAAGCCGGTCCAAGTTCGGATTGAAGTCTGCAACTCGACTTCATGAAGCTGGAATCGCTAGTAATCGCAGATCAGCATGCTGCGGTGAATACGTT-TCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTGTCTGCACCTGAAGCTGCCATCTAAGGTGTGGACAGTGATTGGGGTGAAGTCGTAACAAGGTATCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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3 >484462 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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4 GATGAACGCTGACAGAATGCTTAACACATGCAAGTCT-TTGGCAAGGCGGACGGGTGAGTAACGCGTAAAGAACTTGCCCTGCAGACAGGGATAACAGACGGAAACGACTGACAACACCTGATACTGCGGGAGAGCTTTGCGTCCTATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCGATGATAGGTAGCCGGCCTGAGAGGGTGAACGGCCACAAGGGGACTGAGATACGGCCCTTACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATTCTGTGTGCACGAGGAAGGTTTTCGGATTGTAAAGTGCTTTCAGCAGGGAAGCGGTACCTGCAGAAGAAGCGACGGCTAAA-TACGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTAGGCGGCCAGGCAAGTCTGGGGTGAAAACTTGCGGCTCAACCGCAAGCCTGCCCTGGAAACTGCCTGGCTAGAGTGCTGGAGAGGTGGACGGAACTGCACGAGTAGAGGTGAAATTCGTAGATATGTGCAGGAATGCCGATGATGAAGATAGTTCACTGGACGGCAACTGACGCTGAAGTGCGAAAGCTGGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCCAGCCGTAAACGATGATTACTGGGTGTGGGCCCGTGCCGAAGCAAATGCGATAAGTAATCCGCCTGGGGAGTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGACGCAACGCGAGGAACCTTACCAGATCTTGACATCCAGGTGGTGCATGGCTGTCGACAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCGCCAGTTGCGACTCTGGCGAGACTGCCTGCGAAGAGCAGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGATCTGGGCTACACACGTGCTACAATGGCCGGTACAGAGAGCTGCGAAGCGGCAACGCCCAGCGAATCTTC-AAAGCCGGTCCAAGTTCGGATTGAAGTCTGCAACTCGACTTCATGAAGCTGGAATCGCTAGTAATCGCAGATCAGCATGCTGCGGTGAATACGTT-TCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTGTCTGCACCTGAAGCTGCCATCTAAGGTGTGGACAGTGATTGGGGTGAAGTCGTAACAAGGTATCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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5 >484461 div_ratio=1.127 study_id=40698 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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6 GACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGACAG-GCACGCGGATGGGTGAGTAACGCGTGGGTAACCTGCCCTTAAGTCTGGGATACCATTTGGAAACAGATGCTAATACCGGATACTAAAGGATGGACCTGCGATGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTTGGTGAAGCGGTAATCAACCAGAAAGTCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGATTGATAAGTCTGATGTGAAAGCCTTCGGCTCAACCGAAGAA-CGCATCAGAAACTGTCAATCTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTCTCTGGTCTGTAACTGACGCTGAGGCTCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAAGTGTGGGACAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTAATAGTTGCCACTCTATTGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGGCAGTACAACGAGAAGCGAACCTGTGAAGGCAAGCGGATCTCTTAAAGCTGTTCTCAGTTCGGACTGTAGGCTGCAACTCGCCTACACGAAGCTGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGTTTGTAACACCCAAAGTCGGCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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7 >484454 study_id=40697 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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8 GACGAACGCTGGCGGCGTGCC-AATACATGCAAGTCGAGCGAAGCGGCGGATGGGTGAGTAACACGTGGGGAACCTGCCCCATAGTCTGGGATACCACTTGGAAACAGGTGCTAATACCGGATACTATGGGATGGCCCCGCGGTGCATTAGCTAGTTGGTAAGGTAAAGGCTTACCAAGGCGATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACATTGGGACTGAGACACGGCCCAAACT-CTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTTGGTGAAGCGGTAATCAACCAGAAAGTCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGAAGAATAAGTCTGATGTGAAAGCCCTCGGCTTAACCGAGGAACTGCATCGGAAACTGTTTTTCTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTCTCTGGTCTGCAACTGACGCTGAGGCTCGAAAGCATGGGTAGTGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAAGTGTTGGGCAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGC-GTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTATTAGTTGCCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGGCAGTACAACGAGAAGCGAGCCTGCGAAGGCAAGCGAATCTCTGAAAGCTGTTCTCAGTTCGGACTGCAGTCTGCAACTCGACTGCACGAAGCTGGAATCGCTAGTAATCGCGGATCAG-ACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCTGCAATGCCCAAAGCCGGCGTCTAAGGCAGGGCAGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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9 >484444 div_ratio=1.151 study_id=40696 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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10 GATGAACGCCGGCGGTGTGCC-AATACATGCAAGTCGAACGCAGTGGCGGACGGGTGAGTAACACGTAGGCAACCTGCCCAGAAGCGGGGGACAACATTTGGAAACAAGTGCTAATACCGCATACTTCTGGATGGGCCTGCGGCGCATTAGCTAGTTGGTAAGGCAACGGCTTACCAAGGCAGTGATGCGTAGCCGAGTTGAGAGACTGATCGGCCACAATGGAACTGAGACACGGTCCATACT-CTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGGCGCAAGCCTGATGGAGCAACACCGCGTGAGTGAAGAAGGGTTTCGGCTCGTAAAACTCTGTTGTTGAAGAAGCGGTATTCAACCAGAAAGTCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTTCTAAGTCTGATGTGAAAGCCTTCGGCTTAACCGGAGAAGGGCATCGGAAACTGGATAACTTGAGTGCAAGAGAGGACAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTGTCTAGCTTGCAACTGACGCTGAGGCTCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAGGTGTTGGACAGTGCCGGAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGC-GTGGAGCATGTGGTTTAATTCGAAGCTACGCGAAGAACCTTACCAGGTCTTGACATCCAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTACTAGTTGCCACTCTAGTGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAGATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAGCAGCGAACTCGCAAGGGCCAGCTAATCTCTTAAAACCGTTCTCAGTTCGGACTGCAGTCTGCAACTCGACTGCACGAAGTCGGAATCGCTAGTAATCGCGGATCAG-ATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTTGCAATGCCCAAAGCCGGCGTCTAAGGCAGGGCAGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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11 >484443 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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12 GATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAGCGAAGCGGCGGACGGGTGAGTAACGCGTAGGCAACCTGCCCTTCACAGAGGTATAGCCTCGGGAAACCGGGATTAAAACCACATAGTGAAGGATGGGCCTGCGTCTGATTAGCTGGTTGGTAGGGTAAAAGCCTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAGGTATGAAGGCCTTTGGGTTGTAAGCCTCTGTCCTAGGGGAAGCGGTACCCGAGGAGGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGTGCGTAGGTGGTCTACTAAGCGCGAGGTGAAAGGCAATGGCTCAACCATTGTT-AGCCTTGCGAACTGGCAGACTTGAGTGCAAGAGAGGAAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGCAGATATTAGGAGGAACACCGGCGGCGAAGGCGGCTTTCTGGATTGTAACTGACACTGAGGCACGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGCACTAGGTGTC-GGCGGTGCCGCAGTTAACGCAATAAGTGCTCCGCCTGGGGAGTACGCACGCAAGTGTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGCGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAGACTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTTGCCACTCTAAAGAGACTGCCGGGGA-AACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTACACACGTGCTACAATGGCCGGTACAAAGAGAAGCGATACCGCAAGGGGGAGCAAATCTTA-AAAACCGGTCCCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAGTTGCTAGTAATCGCAGATCAG-ATGCTGCGGTGAATGCGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGAAGTTGGGGGCGCCCGAAGTTGGTACCTAAGGCGAAATCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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13 >484442 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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14 GATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAGCGAAGCGGCGGACGGGTGAGTAACGCGTAGGCAACCTGCCCTTCACAGAGGTATAGCCTCGGGAAACCGGGATTAAAACCACATAGTGAAGGATGGGCCTGCGTCTGATTAGCTGGTTGGTAGGGTAAAAGCCTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAGGTATGAAGGCCTTTGGGTTGTAAGCCTCTGTCCTAGGGGAAGCGGTACCCGAGGAGGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGTGCGTAGGTGGTCTACTAAGCGCGAGGTGAAAGGCAATGGCTCAACCATTGTT-AGCCTTGCGAACTGGCAGACTTGAGTGCAAGAGAGGAAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGCAGATATTAGGAGGAACACCGGCGGCGAAGGCGGCTTTCTGGATTGTAACTGACACTGAGGCACGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGCACTAGGTGTC-GGCGGTGCCGCAGTTAACGCAATAAGTGCTCCGCCTGGGGAGTACGCACGCAAGTGTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGCGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAGACTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTTGCCACTCTAAAGAGACTGCCGGGGA-AACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTACACACGTGCTACAATGGCCGGTACAAAGAGAAGCGATACCGCAAGGGGGAGCAAATCTTA-AAAACCGGTCCCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAGTTGCTAGTAATCGCAGATCAG-ATGCTGCGGTGAATGCGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGAAGTTGGGGGCGCCCGAAGTTGGTACCTAAGGCGAAATCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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15 >484439 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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16 GATAAACGCTGGCGGCGTGCTTAACACATGCAAGTTGGACGGAGTAGCGGACGGGTGAGTAATGCATAAGA-ATCTATCCATCAGAGGGGGACAACTGCGGGAAACCGGAGCTAATACCCCGTACTGATGGAGGAGCTTGTGTCCTATCAGGTAGTTGGTGAGGTAAGAGCTCACCAAGCCGAAGACGGGTAGCCGGGCTGAGAGGTTGTACGGCCACATTGGAACTGAGAGACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCGACGCCGCGTGAGGGAAGACGGCCTTCGGGTTGTAAACCTCTGTTGCAGGGGAAGCGGTACCCTGCGAGGAAGCTCCGGCAAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGAGCGAGCGTTATCCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGAATGACAAGTCAGAAGTGAAAGCGTGGGGCTCAACCCCATGA-TGCGGCTGAAACTGTTATTCTAGAGGCATGGAGAGGCAAACGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAAGAACACCAGTGGCGAAGGCGGTTTGCTGGCCA-TGACTGACGCTCAAGCGCGAAAGCTAGGGTAGCAAACGGGATTAGATACCCCGGTAGTCCTAGCAGTAAACGATGTATGCTGGGTGTGGGTCCGTGCCGAAGTTAACGCGATAAGCATACCGCCTGGGGAGTACGGTCGCAAGATTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCACGTGGTTTAATTCGATGCAAACCGAAGAACCTTACCTGGGCTTGACATGCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTGCCAGTTGCCACTCAGGCGAGACTGCCGCCGACAAGGTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGCCCAGGGCCACACACATGCTACAATGGCCGGTACAAAGGGAAGCGAGGCTGCGAAGCGGAGCGAACCCCA-AAAGCCGGTCCCAGTTCGGATTGCAGTCTGCAACTCGACTGCATGAAGTTGGAATCGCTAGTAATCGCGAATCAG-AAGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATCCGAGTTGGATGCACTCCAAGTCGGCGCCCAAAGTGTGTCTGGTGAGGAGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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17 >484437 study_id=40682 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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18 AACGAACGCTGGCGGCGCGTCTTAAGCATGCAAGTCGAACGGAGTGGCGGACTGGTGAGGAACACGTGGGTAATCTACCCTTAAGATGGGGATAGCTGCTAGAAATAGCAGGTAATACCGAATACTTGAGGATGAGCTTGCGTCCCATTAGCTAGTTGGTGAGGTAAAGGCCCACCAAGGCGACGATGGGTATCCGGCCTGAGAGGGTGATCGGACACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCAGCAGCTAAGAATATTCCGCAATGGACGGAAGTCTGACGGAGCGACGCCGCGTGGATGAAGAAGGCTGAAAAGTTGTAAAATCCTTTTGTTGATGAAGCGGTAATCG-CGAATAAGCCCCGGCTAAT-TACGTGCCAGCAGCCGCGGTAACACGTAAGGGGCGAGCGTTGTTCGGAATTATTGGGCGTAAAGGGCATGTAGGCGGTTATGTAAGCCTGGTGTGAAATCCTGGGGCTTAACCCTAGAATAGCATTGGGTACTGTATAACTTGAATTACGGAAGGGAAACTGGAATTCCAAGTGTAGGGGTGGAATCTGTAGATATTTGGAAGAACACCGGTGGCGAAGGCGGGTTTCTGGCCGATAATTGACGCTGAGATGCGAAAGTGTGGGGATCGAACAGGATTAGATACCCTGGTAGTCCACACTGTAAACGATGTACACTAGGTGTTGGGCAGTGCCAAAGCAAACGCGATAAGTGTACCGCCTGGGGAGTATGCCCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGGTACGCGAGGAACCTTACCTGGGTTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTACTGCCAGTTACGACTCTGGCGGAACTGCCGATGACAAATCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGTCCAGGGCTACACACGTGCTACAATGGTTGCTACAAAGCGAAGCGAGACCGTAAGG-GGAGCAAACCGCAAAAAAGCAATCGTAGTTCGGATTGAAGTCTGAAACTCGACTTCATGAAGTTGGAATCGCTAGTAATCGCGCATCAGCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATCCGAGTTGGGGGTACCCGAAGTCGCTGCCGAAGGTACGCTTGGTGAGGAGGGTGAAGTCGTAACAAGGTAGCCGT |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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19 >484436 study_id=40695 non_ACGT_percent=0.0000 decision=named_isolate |
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614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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20 ATTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAACGAAGTGGCGGACGGGTGAGTAACATTTAGGA-ATCTGCCTAGTAGTGGGGGATAGCTCGGGGAAACTCGAATTAATACCGCATACTATTAGATGAGCCTAAATCAGATTAGCTAGTTGGTGGGGTAAAGGCCC-CCAAGGCGACGATCTGTAACTGGTCTGAGAGGATGATCAGTCACACCGGAACTGAGACACGGTCCGGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGCCTTTTGGTTGTAAAGCACTTTAAGCAGGGAGGCGTTACCTGCAGAATAAGCACCGGCTAAC-TCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGTGTAGGTGGCTCATTAAGTCACATGTGAAATCCCCGGGCTTAACCTGGGAACTGCATGTGATACTGGTGGGCTAGAATATGTGAGAGGGAAGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGCAGCTTCCTGGCATAATATTGACACTGAGATTCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGCCGTTGGGTAGTGGCGCAGTTAACGCGATAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTTTCCTTATTTGCAACTTTAAGGATACTGCCAGTGACAAACTGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGTAGGTACAGAGGGTTGCTACACAGCGATGTGATGCTAATCTCAAAAAGCCTATCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAG-ATGCTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCTATTGCACCAGAAGTAGGTTACCACGGTGTGGTCGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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21 >484430 study_id=40682 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
22 AGTGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGGAGTGGCGCACGGGTGAGTAATATATAGCTAATCTGCCCCTTGCTGGAGGACAACAGTTAGAAATGACTGCTAATACTCCATAGCAAGGGATGAGACTATATCGTATCAGCTAGTCGGTGGGGTAACGGCCTACCGAGGCTATGACGCGTAACTGGTCTGAGAGGATGATCAGTCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTAGGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCAACGCCGCGTGGAGGATGACACTTTTCGGAGCGTAAACTCCTTTTGTTAGGGAAGCGGTACCTAACGAATAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTAGGCGGATTATCAAGTCTCTTGTGAAATCTAACGGCTTAACCGTTAAACTGCTTGGGAAACTGATAATCTAGAGTAAGGGAGAGGCAGATGGAATTCTTGGTGTAGGGGTAAAATCCGTAGATATCAAGAAGAATACCTATTGCGAAGGCGATCTGCTGGAACTTAACTGACGCTAATGCGTGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTATACCGGTTGTTGCTCAGTAATCCACCTAACGGATTAAGTATACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATAGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGATACGCGAAGAACCTTACCCGGACTTGATATCCAGGTGCTGCACGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCACGTCATTAGTTGCCACTCTAATGAGACTGCCTTCG-TAAGGAGGAGGAAGGTGTGGACGACGTCAAGTCATCATGGCCCTTATGTCCGGGGCGACACACGTGCTACAATGGCATATACAATAAGACGCAATATCGTAAGATGGAGCAAATCTAA-AAAATATGTCCCAGTTCGGATTGGAGTCTGCAACTCGACTCCATGAAGCCGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGGGTCTTGTACTCACCGCCCGTCACACCATGGGAGTTGATTTCACTCGAAGCGGGCCTCCACAGTGGAATCAGCGACTGGGGTGAAGTCGTAACAAGGTAACCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
23 >484425 div_ratio=1.104 study_id=37832 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
24 GATGAACGCTAGCGACAGGCTTAACACATGCAAGTCGAGGG-ACCGGCGCACGGGTGAGTAACGCGTATGCAACTTGCCTATCAGAGGGGGATAACCCGGCGAAAGTCGGACTAATACCGCATGCTGATAGATAGGCATGCGTTCCATTAGGCAGTTGGCGGGGTAACGGCCCACCAAACCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGTACTGAGACACGGACCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGCTGAACCAGCCAAGTCGCGTGAGGGATGAAGGTTTATGGATCGTAAACCTCTTTTATAAGGGAATATGTACCTTATGAATAAGGATCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCCTTTTAAGTCAGCGGTGAAAGTCTGTGGCTCAACCATAGAATTGCCGTTGAAACTGGGGGGCTTGAGTATGTTTGAGGCAGGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCAGAACCCCGATTGCGAAGGCAGCCTGCCAAGCCATGACTGACGCTGATGCACGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAGTCCACGCAGTAAACGATGATCACTAGCTGTTTGCAAGCGGCACAGCGAAAGCGTTAAGTGATCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGTTTGAACGCGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTGCCACTAGTTACGACTCTGGTGGGACTGCCAGCG-TAAGCTGGAGGAAGGCGGGGATGACGTCAAATCAGCACGGCCCTTACATCCGGGGCGACACACGTGTTACAATGGCGTGGACAAAGGGAGGCCACCTGGCGACAGGGAGCGAATCCCC-AAACCACGTCTCAGTTCGGATCGGAGTCTGCAACCCGACTCCGTGAAGCTGGATTCGCTAGTAATCGCGCATCAGCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGGGAGCCGGGGGTACCTGAAGTCCGGGCCTAGGGTAAAACTGGTGACTGGGGCTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
25 >484424 study_id=37831 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
26 GACGAACGCTGGCGGCGTGCC-AATACATGCAAGTCGAGCGAAGCGGCGGATGGGTGAGTAACACGTGGGGAACCTGCCCCATAGTCTGGGATACCACTTGGAAACAGGTGCTAATACCGGATACTATGGGATGGCCCCGCGGTGCATTAGCTAGTTGGTAAGGTAAAGGCTTACCAAGGCGATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACATTGGGACTGAGACACGGCCCAAACT-CTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTTGGTGAAGCGGTAATCAACCAGAAAGTCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGAAGAATAAGTCTGATGTGAAAGCCCTCGGCTTAACCGAGGAACTGCATCGGAAACTGTTTTTCTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTCTCTGGTCTGCAACTGACGCTGAGGCTCGAAAGCATGGGTAGTGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAAGTGTTGGGCAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGC-GTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTATTAGTTGCCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGGCAGTACAACGAGAAGCGAGCCTGCGAAGGCAAGCGAATCTCTGAAAGCTGTTCTCAGTTCGGACTGCAGTCTGCAACTCGACTGCACGAAGCTGGAATCGCTAGTAATCGCGGATCAG-ACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCTGCAATGCCCAAAGCCGGCGTCTAAGGCAGGGCAGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
27 >484408 study_id=37830 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
28 GATGAACGCTGACAGAATGCTTAACACATGCAAGTCAACTTGGGTGGCGGACGGGTGAGTAACGCGTAAAGAACTTGCCTCACAGCTAGGGACAACATTTGGAAACGAATGCTAATACCTAATACTGTGAGAGAGCTTTGCGTCCCATTAGCTAGTTGGAGAGGTAACGGCTCACCAAGGCGATGATGGGTAGCCGGCCTGAGAGGGTGATCGGCCACAAGGGGACTGAGACACGGCCCTTACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAGTCTGATCCAGCAATTCTGTGTGCACGATGAAGTTTTTCGGAATGTAAAGTGCTTTCAGTTGGGAAGCGGTACCAACAGAAGAAGTGACGGCTAAA-TACGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGTGGTTATGTAAGTCTGATGTGAAAATGCAGGGCTCAACTC--GTATTGCGTTGGAAACTGTATAACTAGAGTACTGGAGAGGTAAGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGGGAAGCCAGCTTACTGGACAGATACTGACGCTGAAGCGCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATTACTAGGTGTTGGGCAGCGCCCAAGCAAACGCGATAAGTAATCCGCCTGGGGAGTACGTACGCAAGTATGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGACGCAACGCGAGGAACCTTACCAGCGTTTGACATCCAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTTTCGTATGTTACGACTCATGCGATACTGCCTACGATGAGTAGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATACGCTGGGCTACACACGTGCTACAATGG-GTAGACAGAGAGTCGCAAAGCTGTGAAGTGGAGCTAATCTCA-GAAAACTATCTTAGTTCGGATTGTACTCTGCAACTCGAGTACATGAAGTTGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTTCTCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTGGTTGCACCTGAAGTAGCCTCCGAGGGTGTGATTAGCGATTGGGGTGAAGTCGTAACAAGGTATCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
29 >484407 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
30 GATGAACGCTGGCGGCGCGCCTAACACATGCAAGTCGAACG-AGTGGCGAACGGGTGAGTAACACGTGACCAACCCGCCCCCCC-ACCGGGACAACCTCGGGAAACCGAGGCTAATACCGGATAGGAGGGGACGGGGTCGCGGCCCATCAGGTAGACGGCGGGGCGAAGGCCCGCCGTGCCGACGACGGGTAGCCGGGCTGAGAGGCCGATCGGCCACATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGCGGGAAGGAGGCCTTCGGGTCGTAAACCGCTTTCAGCAGGGAAGCGGTACCTGCAGAAGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGCAGGCGGCCCGCCAAGCGGCCTCTCGAAGCCGGGGGCTCAACCCCCGGAAGCGACCCGA-ACTGGC-GGCTCGAGTGGGGCAGGGGAGGATGGAATTCCCGGTGTAGCGGTGAAATGCGCAGATATCGGGAGGAACACCGACGGCGAAGGCAGCCCTCTGGGCCTTCACTGACGCTGAGGCGCGAAAGCTGGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCCAGCCGTAAACGATGGGCGCTAGGTGCGGGGCCGTGCCGCAGCCAACGCATTAAGCGCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGCGGAGCATGTGGCTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCCGCCGCATGTTGCCACTCATGCGGGACCGCCGGCGCCAAGCCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGCCCCCCATGCCCTGGGCCGCACACGTGCTACAATGGCCGGCACAGCGGGCAGCGGACCCGCGAGGGCGAGCGAATCCCTTAAAGCCGG-CCCAGTTCGGATCGGAGGCTGCAACCCGCCTCCGTGAAGCCGGAGTTG.................................................................................................................................................. |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
31 >484406 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
32 GATGAACGCTGGCGGCGCGCCTAACACATGCAAGTCGAAGGTAGTGGCGAACGGGTGAGTAACACGTGACCAACCCGCCCCCCCCACCGGGACAACCTCGGGAAACCGAGGCTAATACCGGATAGGAGGGGACGGGGTCGCGGCCCATCAGGTAGACGGCGGGGCGAAGGCCCGCCGTGCCGACGACGGGTAGCCGGGCTGAGAGGCCGATCGGCCACATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGGAACCCTGACGCAGCGACGCCGCGTGCGGGAAGGAGGCCTTCGGGTCGTAAACCGCTTTCAGCAGGGAAGCGGTACCTGCAGAAGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGCAGGCGGCCCGCCAAGCGGCCTCTCGAAGCCGGGGGCTCAACCCCCGGAAGCGACCCGA-ACTGGCGGGCTCGAGTGGGGCAGGGGAGGATGGAATTCCCGGTGTAGCGGTGAAATGCGCAGATATCGGGAGGAACACCGACGGCGAAGGCAGCCCTCTGGGCCTTCACTGACGCTGAGGCGCGAAAGCTGGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCCAGCCGTAAACGATGGGCGCTAGGTGCGGGGCCGTGCCGCAGCCAACGCATTAAGCGCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGCGGAGCATGTGGCTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACAT-CAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCCGCCGCATGTTGCCACTCATGCGGGACCGCCGGCGCCAAGCCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGCCCC--ATGCCCTGGGCCGCACACGTGCTACAATGGCCGGCACAGCGGGCAGCGGACCCGCGAGGGCGAGCGAATCCCTTAAAGCCGGCCCCAGTTCGGATCGGAGGCTGCAACCCGCCTCCGTGAAGCCGGAGTTGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACCCGAGTCGTCTGCACCCGAAGCCGCCGTCGAAGGTGTGGAGGGTGAGGGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
33 >484401 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
34 GATGAACGCTGGCTACAGGCTTAACACATGCAAGTCGAGGG-ACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGCCTCTGACTGAGGGATAACCCGTCGAAAGTCGGCCTAATACCTCATGGTCAGGGATGGGGATGCGTCTGATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCTACGATCAGTAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGCAGGAAGACGGCCTATGGGTTGTAAACTGCTTTTATGCGGGGATAGGTACCGCATGAATAAGGACCGGCTAAT-TCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCCGTGGATTAAGCGTGTTGTGAAATGCAGGTGCTCAACGTCTGCACTGCAGCGCGAACTGGTCCACTTGAGTGTGCGCAACGCAGGCGGAATTCGTCGTGTAGCGGTGAAATGCTTAGATATGACGAAGAACTCCGATTGCGAAGGCAGCTTGCGGGAGCACAACTGACGCTGAAGCTCGAAAGTGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGATGCCC-GTTTCAGGGGT-GACCAAGCGAAAGCATTAAGCATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAATTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTTTCTTCAGTTGCCACTCTGTAGATACTGCCACCG-CAAGGTGGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGCCGGTACAGAGAGTTGATTTTGTGCAAACACGATCTAATCCTT-AAATCCGGTCCCAGTTCGGACTGGGGTCTGCAACCCGACCCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTGCCTGAAGTCTGGGCCTAGGGCAAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
35 >484394 div_ratio=1.098 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
36 GATGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAACGGAGTGGCGGACGGGTGAGTAACACGTGGGCAACCTGGCTCATAGAGGGGGATAACAGAGAGAAATTTCTGCTAATACCGCATACTATGAGATGGACCCGCGTCTGATTAGCCAGTTGGCAGGGTAAGAGCCTACCAAAGCGACGATCAGTAGCCGATCTGAGAGGATGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGGGGAACCCTGATGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGCAGTACCTGAATAAGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGAATGGCAAGTCTGAAGTGAAATGCCCGGGCTCAACCCGGGAACTGCTTTGGAAACTGTCGATCTGGAGTGTTGGAGAGGTAAGTGGAATTCCTGGTGTAGCGGTGAAATGCGTAGAGATCAGGAAGAACACCGGAGGCGAAGGCGGCTTACTGGACAAAGACTGACGTTGAGGCTCGAAAGCGTGGGAAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGTCGGTGCCGACGCAAACGCAATAAGTATTCCACCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGAGATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCGTCAGTAGCCACTCTGATGAGACTGCCGGGGATAACCCGGAGGAAGGCGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCGACACACGTGCTACAATGGCGGAAACAGAGGGAAGCGAGGGGGCGACCCGGAGCAAATCTCAAAAATACCGTCTCAGTTCGGACTGCAGTCTGCAACTCGACTGCACGAAGCCGGAATCGCTAGTAATCGCGGATCAG-ATGCCGCGGTGAATCCGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTCGGTAATGCCCGAAGTCAGTGCCGAAGG-AGGACAGATAACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
37 >484391 study_id=39086 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
38 GATGAACGCTGGCGGCGTGCC-AATACATGCAAGTCGAACGCAGTGGCGAACGGGTGAGTAACACGTGGGTAACCTACCTCTTAGCAGGGGATAACATTTGGAAACAAGTGCTAATACCGTATACTAAGAGATGGACCCGCGGTGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACAATGGGACTGAGACACGGCCCATACT-CTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGGCGCAAGCCTGATGGAGCAACGCCGCGTGTGTGATGAAGGGTTTCGGCTCGTAAAACACTGTTATAAGAGAAGCGGTATCTTACCAGAAAGGAACGGCTAAA-TACGTGCCAGCAGCCGCGGTAATACGTATGTTCCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGACGGTTATTTAAGTCTGAAGTGAAAGCCCTCAGCTCAACTGAGGAATGGCTTTGGAAACTGGATGACTTGAGTGCAGTAGAGGAAAGTGGAACTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTTTCTGGACTGTAACTGACGTTGAGGCTCGAAAGTGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACACCGTAAACGATGAGTGCTAGATGTTCGAGAGTGTCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGC-GTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATTATTAGTTGCCACTCTAGTGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGCATATACAACGAGTCGCCAACCCGCGAGGGTGCGCTAATCTCTTAAAGTATGTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGTCGGAATCGCTAGTAATCGCGGATCAG-ACGCCGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGAGAGTTTGTAACACCCAAAGCCGGCGTCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
39 >484379 study_id=39086 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
40 GACGAACGCTGGCGGCGTGCCTAATACATGCAAGTAGAACGCAGTTGCGAACGGGTGAGTAACGCGTAGGTAAC-TGCCTGGTAGCGGGGGATAACTATTGGAAACGATAGCTAATACCGCATACTACCAGATGGACCTGCGTTGTATTAGCTAGTTGGTGGGGTAAGGGCTCACCAAGGCGACGATACATAGCCGACCTGAGAGGGTGATCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTAAGAGAAGCGGTATCTTACCAGAAAGGGACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTA-GGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAAGCGGCTCTCTGGCTTGTAACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGGTGTTAG-TAGTGCCGTAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTGTTAGTTGCCACTCTAGCGAGACTGCCGGTAATAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGCTGGTACAACGAGTCGCAAGCCGGTGACGGCAAGCTAATCTCTTAAAGCCAGTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAGAGTTTGTAACACCCGAAGTCGGCGCCTAAGGTGGGATAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
41 >484376 study_id=39086 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
42 GATGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAGCGAAGCGGGG-ACGGGTGAGTAACACGTGGATAACCTCCT-ATAAGACTGGGATAACTTCGGGAAACCGGAGCTAAACCGG-ATACTTATAGATGGATCCGCGCCGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAACGATGCGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTATTAGGGAAGCGGTACCTAATCAGAAAGCCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAG-GGCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGTAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAA-CCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTTGTAACACCCGAAGCCGGCGTCGAAGGTGGGACAAATGATTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
43 >484369 study_id=39086 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
44 GATGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAGCGAAGCGGGG-ACGGGTGAGTAACACGTGGATAACCTCCT-ATAAGACTGGGATAACTTCGGGAAACCGGAGCTAAACCGG-ATACTTATAGATGGATCCGCGCCGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAACGATGCGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTATTAGGGAAGCGGTACCTAATCAGAAAGCCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAG-GGCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGTAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGTGGCGAA-CCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTTGTAACACCCGAAGCCGGCGTCGAAGGTGGGACAAATGATTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
45 >484365 study_id=39086 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
46 ..........................................AGCGGGG-ACGGGTGAGTAACACGTGGATAACCTCCT-ATAAGACTGGGATAACTTCGGGAAACCGGAGCTAAACCGG-ATACTTATAGATGGATCCGCGCTGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAACGATGCATAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTATTAGGGAAGCGGTACCTAATCAGAAAGCCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAG-GGCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGTAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAA-CCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTTGTAACACCCGAAGCCGGCGTCGAAGGTGGGACAAATGATTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
47 >484357 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
48 GACGAACGCTGGCGGCGCGCTTAACACATGCAAGTCGTGCGAAGCGGCGGACGGGTGAGTAACACGTGAGT-AGCTGTCCTAAGGAGGGGGATAACGCCTGGAAACGGGTGCTAAAACCCCATACTAACCTGTGTGCTCGCGGCCTATCAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCTAAGACGGGTAGCCGGCCTGAGAGGGTGTACGGCCACACTGGAATTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTGGGCAATGGGCGAAAGCCTGACCCAGCGACGCCGCGTTGGGGATGAAGCCCTTCGGGGTGTAAACCCATGTTGTAGGGGACGCGGTACCCTACGAGGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAAGACGTAGGGGGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCACGCAGGCGGTGCGCCAAGTCGAGGGTGTAAAGTTACGGCTCAACCGTGACATTGCAATCGATACTGGCGCGCTGGAGTGCGGGAGAGGGAAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACGCCAGTGGCGAAGGCGGCTTCCTGGCCCGCGACTGACGCTCATGTGCGAAAGCCAGGGGAGCGAACCGGATTAGATACCCGGGTAGTCCTGGCCGTAAACGATGGGTGCTAGGTGTAGGCCTGTGCCGCAGTTAACGCGATAAGCACCTCGCCTGGGGAGTACGGTCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCACGTGGTTTAATTCGATGCAAACCGAAGAACCTTACCTGGGTTTGACATGCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCGCCTAGTTGCCAC-TCTAGGCGGACGCCGGCGACAAGTCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCTTTAAGCCCAGGGCGACACACGTGCTACAATGGCCAGCACAGAGGGCGGCAAGTCCGCGAGGGCAAGCGAATCCCTTAAAGCTGGTCTTAGTTCGGATCGCAGTCTGCAACCCGACTGCGTGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCATACGGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACCCGAGTTGGGTGCTCCCGAAGCCGCCGTCGAAGGAGTGTCTGATAAGGGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
49 >484347 div_ratio=1.058 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
50 ................................................................................................................................................................GGGTAAGTGGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCTTAGGGTTGTAAAGTACTTTCAGTTGGGAGGCGTTACCAACAGAAGAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTGATTAAGTTAGATGTGAAATCCCCGGGCTTAACCTGGGAATGGCATCTAAGACTGGTCAGCTAGAGTCTTGTAGAGGGGGGTAGAATTCCATGTGTAGCGGTGAAATGCGTAGAGATGTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGATTTGGAGGTTGTGGCTTCCGGAGCTAACGCGTTAAATCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTTGCAACTCAAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAACTCATAAAGTACGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTAGATCAG-ATGCTACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
51 >484343 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
52 ...............................................................GTATGGGG-ATCTGCCCGATAGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATACTATCGGATGAACCCATATGGGATTAGCTAGTAGGTGAGGTAATGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCCTAGGGTTGTAAAGTACTTTCAGTCGGGAGGCGTTACCGACAGAAGAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTGATTAAGTTAGATGTGAAATCCCCGGGCTTAACCTGGGAATGGCATCTAAGACTGGTCAGCTAGAGTCTTGTAGAGGGGGGTAGAATTCCATGTGTAGCGGTGAAATGCGTAGAGATGTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGATTTGAAGGTTGTGGCTTTCGGAGCTAACGCGTTAAATCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTTGCAACTCAAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAACTCATAAAGTACGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTAGATCAG-ATGCTACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
53 >484338 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
54 GATGAACGCTGGCTACAGGCTTAACACATGCAAGTCGTGGG-ACCGGCGCACGGGTGAGTAACGCGTACCGAACCTGCCCATCACACAGGGATAGGCTTGCGAAAGCAAGATTAATACT-GATGGTGATGGATGGCGGTGCGTCCCATTAGGACGTTGGCGGGGTAACGGCCCACCAATCCTTCGATGGGTAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGATACGGTCCAAACTC-TACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGCGGGATGAAGGCCTTGTGGTCGTAAACCGCTTTTATCAGTGAATAGGTAGCTGAAGAAAAAGGACCGGCTAAT-TCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGAATTATTGGGTTTAAAGGGAGCGCAGGCGG-GAGTTAAGTCAGCTGTTAAATATCAGAGCCCAACTCTGTTAT-GCAGTTGAAACTATATTTCTTGAGTACGCACAGGGATGGCGGAATTCAGGGTGTAGCGGTGAAATGCTTAGATATCCTGAAGAACTCCGATCGCGAAGGCAGCCATCCGGAGCGTAACTGACGCTGAGGCTCGAAGGTGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGAATACTCGCAGTTCGCGAGTTGTCCAGCGAAAGCGTTAAGTATTCCACCTGGGGAGTACGCCGGCAA-GGTGAAACTCAAAGGAATTGACGGGGG-CCCCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAAC--GAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTTTCTACGTTTGCAACTCCGTGGATACTGCCGCCG-CAAGGCGGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGTCGGAGCAGCAGGAAGCTACCTGGCGACAGGATGCTGATCCCA-AAACCCGGCCTCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCCGGATTCGCTAGTAATCGCGCATCAGCATGGCGCGGTGAATACGT-CCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTGCCTGAAAGCCGGGCCTAGGGTAAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
55 >484333 div_ratio=1.149 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
56 GATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGG-ACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGCCCACCACTTGGGGATAACCTTGCGAAAGTAAGACTAATACCCAATGGTGATGGATGGGGATGCGTCTGATTACCTTGTTGGCGGGGTAACGGCCCACCAAGGCGACGATCAGTAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGCAGGATGACGGCCTATGGGTTGTAAACTGCTTTTATAAGGGAATATGTACCTTATGAATAAGGACCGGCTAAT-TCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCCGGAGATTAAGCGTGTTGTGAAATGTAGACGCTCAACGTCTGCACTGCAGCGCGAACTGGTTTCCTTGAGTACGCACAAAGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTGGAGCGCAACTGACGCTGAAGCTCGAAAGTGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGATGCCC-GCTTTGGTAGC-GGCCAAGCGAAAGCATTAAGCATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAATTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTCTCCTTAGTTGCCACTCTGGGGACACTGCCACCG-TAAGGTGGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGCAGGTACAGAGAGACGGTTGTACGTAAGTACGATCAAATCCTT-AAAGCCTGTCTCAGTTCGGACTGGGGTCTGCAACCCGACCCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGCGCCTAAAGTCCGGGCCTAGGGCGAAACTGGTAATTGGGGCTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
57 >484332 div_ratio=1.148 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
58 GATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGG-ACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGCCCACCACTTGGGGATAACCTTGCGAAAGTAAGACTAATACCCAATGGTGATGGATGGGGATGCGTCTGATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCGACGATCAGTAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGCAGGATGACGGCCTATGGGTTGTAAACTGCTTTTATAAGGGAATATGTACCTTATGAATAAGGACCGGCTAAT-TCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCCGGAGATTAAGCGTGTTGTGAAATGTAGGCGCTCAACGTCTGCACTGCAGCGCGAACTGGTTTCCTTGAGTACGCACAAAGTGGGTGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTGGAGCGCAACTGACGCTGAAGCTCGAAAGTGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGATGCCC-GCTTTGGTAGC-GGCCAAGCGAAAGCATTAAGCATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAATTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTCTCCTTAGTTGCCACTCTGGGGACACTGCCACCG-TAAGGTGGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGCAGGTACAGAGAGACGGTTGTACGTAAGTACGATCAAATCCTT-AAAGCCTGTCTCAGTTCGGATTGGGGTCTGCAACCCGACCCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGCGCCTAAAGTCCGGGCCTAGGGCGAAACTGGTAATTGGGGCTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
59 >484331 study_id=38944 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
60 ATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGGACG-AGTGGCGAACGGGTGAGTAATATATCGGA-ACGTACCGAGTAATGGGGGATAACTAATCGAAAGATTAGCTAATACCGCATATTATTCGAGCGGCCGATATCTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCGGGTCTGAGAGGATGATCCGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTCTGAAGAAGGCCTTCGGGTTGTAAAGGACTTTTGTCAGGGAAGCGGTACCTGAAGAATAAGCACCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCAGACGGTTACTTAAGCAGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCGTTCTGAACTGGGTGACTAGAGTGTGTCAGAGGGAGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAGCCTCCTGGGATAACACTGACGTTCATGCTCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAATTAGCTGTTGGCTAGTAGCGTAGCTAACGCGTGAAATTGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCCACTCTAATGAGACTGCCGGTGACAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGACCAGGGCTTCACACGTCATACAATGGTCGGTACAGAGGGTAGCCAAGCCGCGAGGTGGAGCCAATCTCACAAAACCGATCGTAGTCCGGATTGCACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGGGATACCAGAAGTAGGTTACCACGGTATGCTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
61 >484326 study_id=38944 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
62 ATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGGACG-AGTGGCGAACGGGTGAGTAACATATCGGA-ACGTACCGAGCAGTGGGGGATAACTAATCGAAAGATTAGCTAATACCGCATACTGTTTGAGCGGCCGATATCTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCGGGTCTGAGAGGATGATCCGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTCTGAAGAAGGCCTTCGGGTTGTAAAGGACTTTTGTCAGGGAAGCGGTACCTGAAGAATAAGCACCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGGGCGCAGACGGTTACTTAAGCAGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCGTTCTGAACTGGGTGACTAGAGTGTGTCAGAGGGAGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAGCCTCCTGGGATAACACTGACGTTCATGCCCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCGATTAGCTGTTGGCTAGTAGCGAAGCTAACGCGTGAAATCGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCCACTCTAATGAGACTGCCGGTGACAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGACCAGGGCTTCACACGTCATACAATGGTCGGTACAGAGGGTAGCCAAGCCGCGAGGTGGAGCCAATCTCACAAAACCGATCGTAGTCCGGATTGCACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGGGATACCAGAAGTAGGTTACCACGGTATGCTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
63 >484325 study_id=38944 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
64 ATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGGACG-AGTGGCGAACGGGTGAGTAACATATCGGA-ACGTACCGAGTAGTGGGGGATAACTGATCGAAAGATCAGCTAATACCGCATACTATTCGAGCGGCCGATATCTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCGGGTCTGAGAGGATGATCCGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTCTGAAGAAGGCCTTCGGGTTGTAAAGGACTTTTGTCAGGGAAGCGGTACCTGAAGAATAAGCACCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCAGACGGTTACTTAAGCAGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCGTTCTGAACTGGGTGACTAGAGTGTGTCAGAGGGAGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAGCCTCCTGGGATAACACTGACGTTCATGCTCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAATTAGCTGTTGGCCAGTAGCGTAGCTAACGCGTGAAATTGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCCACTCTAATGAGACTGCCGGTGACAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGACCAGGGCTTCACACGTCATACAATGGTCGGTACAGAGGGTAGCCAAGCCGCGAGGTGGAGCCAATCTCACAAAACCGATCGTAGTCCGGATTGCACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGGGATACCAGAAGTAGGTTACCACGGTATGCTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
65 >484322 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
66 GCT-ACTGCTATTGGGATCGTTAAGCCATGCAAGTCGAACGACGTGGCGTACGGCTCAGTAACACGTGGATAACCTACCCTTAGGACTGGGATAACCCTGGGAAACTGGGGATAATACTGGATACCTAAGGATGGGTCTGCGGCCGATTAGGTAGTTGGTTAGGTAATGGCTTACCAAGCCTTTGATCGGTACGGGTTGTGAGAGCAAGAGCCCGGAGATGGAACCTGAGACAAGGTTCCAGGCCCTACGGGGTGCAGCAGGCGCGAAACCTCCGCAATGTGAGAAATCGCGACGGGGGGATCCCAAGTGCCAT----TCT--TAAC--GGG--A-TGGCTTTTCATTAGT-------GCTTTTGGAATAAGAGCTGGC-AAGACCGGTGCCAGCCGCCGCGGTAACACCGGCAGCTCTAGTGGTAGCAGTTTTTATTGGGCCTAAAGCGTCCGTAGCCGGTTTAATAAGTCTCTGGTGAAATCCTGCAGCTTAACTGTGGGAATGCTGGAGATACTATTAGACTTGAGATCGGGAGAGGTTAGAGGTACTCCCAGGGTAGAGGTGAAATTCTGTAATCCTGGGAGGACCGCCTGTTGCGAAGGCGTCTGACTGGAAC-GATCTGACGGTGAGGGACGAAAGCTAGGGGCGCGAACCGGATTAGATACCCGGGTAGTCCTAGCTGTAAACGATGCGGACTTGGTGTTGGGCAGTGCCGAAGGGAAGCTGTTAAGTCCGCCGCCTGGGAAGTACGGTCGCAAGACTGAAACTTAAAGGAATTGGCGGGGGAGCACACAACGCGTGGAGCCTGCGGTTTAATTGGATTCAACGCCGGACATCTCACCAGAGG--------GAGGAGGTGCATGGCCGCCGTCAGCTCGTACCGTGAGGCGTCCTGTTAAGTCAGGCAACGAGCGAGACCCACGCTCTTAGTTACCACACTAAGGGGACCGCCTATGATAAATAGGAGGAAGGAGTGGACGACGGTAGGTCCGTATGCCCCGAATCCTCTGGGCAACACGCGGGCTACAATGGCTGAGACAATGGGTTCCGACGCCGAAAGGCGGAGGTAATCCTCTAAACTTAGTCGTAGTTCGGATTGAGGACTGTAACTCGTTCTCATGAAGCTGGAATGCGTAGTAATCGCGTGTCAC-ATCGCGCGGTGAATACGTCCCTGCTCCTTGCACACACCGCCCGTCACGCCACCCAAAAAGGGATTGGATGA-GGATGATTCGAATCTAGTTTTTTTAAGGAGGGCGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
67 >484320 study_id=38100 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
68 GACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAAC-GAGTGGCGAACGGGTGAGTAATACGCGGGCAACCTGCCCCTCTCTTCGGGATAAGCTTTGGAAACGGGGTCTAATACCGGATGGCGGGGGATGGGCTCGCGGCCTATCAGCTTGTTGGTGGGGTGACGGCT-ACCAAGGC-GCGACGGGTAGCCGGCCTGAGAGGGTGGTCGGCCACACTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGGATATTGCACAATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGGGGGATGGAGGCTTTCGGGTTGTAAACCCCTTTCGGCGCGGGAAGGGTACGCGTCAAAGAAGCGCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTCGTAGGCGGCTTGTCGCGTCTGCTGTGAAAC-GCGGGGCTCAACTCCGCGCGTGCAGTGGGTACGGGCAGGCTGGAGTGCGGCAGGGGTGGCTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAAGAACACCGATGGCGAAGGCAGGCCACTGGGCCGC-ACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGTTGGGAACTAGGTGTGGGGCTGCGCCGGAGCTAACGCGTTAAGTTCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCGATGCAACGCGAAGAACCTTACCAAGGCTTGACATGCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCCGTGTTGCGACTCACGGGGGACTGCCGGGGTCAACTCGGAGGAAGGTGGGGACGACGTCAAATCATCATG-CCCTTATGCCTTGGGCTTCACGCATGCTACAATGGCCGGTACAGAGGGTGGCGATGCCGTGAGGCGGAGCGAATCTTGTAAAGCCGGTCTCAGTTCGGATCGGGGTCTGCAACTCGGGCCCGTGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCACGCTGCGGTGAATACGTTCTCGGGCCTTGTACACACCGCCCGTCACGTCACGAAAGTCGGCGACGCCCGAAGCCCGGGTCGAAGGCGGGGTTGGCGATTGGGACGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
69 >484315 study_id=39086 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
70 GACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAAC-GAGTGGCGAACGGGTGAGTAACACGTGGGTGATCTGCCCTGCACTTCGGGATAAGCTTGGGAAACTGGGTCTAATACCGGATAGTGTAGGATGAGCTCGCGGCCTATCAGCTTGTTGGTGGGGTAATGGCT-ACCAAGGC-GCGACGGGTAGCCGGCCTGAGAGGGTGTACGGCCACATTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGGGGGATGAAGGCCTTCGGGTTGTAAACTCCTTTCGCTAGGGACGCGGTACCTAGATAAGAAGCACCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCTCGTAGGTGGTTTGTCGCGTCGTCTGTGAATT-CTGGGGCTTAACTCCGGGCGTGCAGGCGATACGGGCAAACTTGAGTGCTGTAGGGGTAACTGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGGTTACTGGGCAGT-ACTGACGCTGAGGAGCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGGTGGGCGCTAGGTGTGAGGTCGTGCCGTAGCTAACGCATTAAGCGCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGCTTGACATACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCGACTCATGAGAGACTGCCGGGGTTAACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATG-CCCTTATGTCCAGGGCTTCACACATGCTACAATGGTCGGTACAACGCGCTGCGACACTGTGAGGTGGAGCGAATCGCTGAAAGCCGGCCTTAGTTCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCATGCTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACGTCATGAAAGTTGGTAACACCCGAAGCCGGCGTCGAAGGTGGGATCGGCGATTGGGACGAAGTCGTAACAAGGTACCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
71 >484309 div_ratio=1.043 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
72 GATGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAACGAAGTGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCTCACACTGGGGGACAACAGCTGGAAACGGCTGCTAATACCGCATAGTGTGAGATGGACCCGCGTCTGATTAGCTAGTTGG-TAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGACCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGCGGTACCTGACTAAGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCAA-G-AAGTCTGAAGTGAAAGCCCGGGGCTCAACCGCGGGACTGCTTTGGAAACTGTTTTGCTAGAGTGCTGGAGAGGTAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTACTGGACAGTAACTGACGTTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTTGGTCGGTGCCGTCGCAAACGCAATAAGTATTCCACCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAGTCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTAAGTAGCCACTCTTGGGAGACTGCCAGGGATAACCTGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGCG-TAACAAAGGGAAGCGAGCT-GTGAAGCTGAGCAAATCTCAAAAATACG-TCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGCGGATCAG-ATGCCGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTCAGTAACGCCCGAAGTCAGTGCCGAAGGCGGGACCGATAACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
73 >484305 study_id=38646 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
74 ATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACG-AGTGGCGGACGGGTGAGTAATGTCTGGGA-AACTGCCCGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATACCATCGGATGTGCCCAGATGGGATTAGCTTGTTGGTGGGGTAACGGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCTTCGGGTTGTAAAGTACTTTCAGCGAGGAGGCGTTACTCGCAGAAGAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTTGAAACTGGCAGGCTTGAGTCTCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACG-CCTAAACGATGTCTATTTGGAGGTTGTGGCTTCCGGAGCTAACGCGTTAAATAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGAC-GGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTTGCAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCATATACAAAGAGAAGCGACCTCG............................................................................................................................................................................................................................... |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
75 >484304 study_id=38646 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
76 GATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAAC-GAGTGGCGAACGGGTGAGTAATGCGTGACCAACCTGCCTTGTGCACCGGAATAGCTCCTGGAAACGGGTGGTAATACCGGATGGCATGGGATGGGGTCGCGTCCTATCAGCTTGTTGGCGGGGTGACGGCC-ACCAAGGC-TTGACGGGTAGCCGGCCTGAGAGGGTGACCGGCCACATTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGCGGGATGGAGGCCTTCGGGTTGTAAACCGCTTTTGATTGTCAGCGTGTAGCTTTCGAATAAGCACCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTAGGCGGTTCGTCGCGTCCGGTGTGAAGT-CCATCGCTTAACGGTGGATCTGCGCCGGGTACGGGCGGGCTGGAGTGCGGTAGGGGAGACTGGAATTCCCGGTGTAACGGTGGAATGTGTAGATATCGGGAAGAACACCAATGGCGAAGGCAGGTCTCTGGGCCGT-ACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGATGCTGGATGTGGGGCTGTGTCGGAGCTAACGCGTTAAGCATCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGAAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGCTTGACATGCAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCGCGTGTTGCAACTCACGTGGGACCGCCGGGGTCAACTCGGAGGAAGGTGGGGATGACGTCAGATCATCATG-CCCTTACGTCCAGGGCTTCACGCATGCTACAATGGCCGGTACAACGGGATGCGACACCGTGAGGTGGGGCGGATCCCTGAAAACCGGTCTCAGTTCGGATCGCAGTCTGCAACCCGACTGCGTGAAGGCGGAGTCGCTAGTAATCGCAGATCAGCACGCTGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGTGGGTAGCACCCGAAGCCGGCGTCTAAGGTGAGACTCGTGATTGGGACTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
77 >484303 study_id=38595 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
78 GATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAAC-GAGGGGCGAACGGGTGAGTAATGCGTGACCGACCTGCCCCATGCACCGGAATAGCTCCTGGAAACGGGTGGTAATGCCGGATGGCATGGGATGGGGTCGCGTCCTATCAGCTTGATGGCGGGGTAACGGCC-ACCATGGC-TCGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACATTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGAGGGATGGAGGCCTTCGGGTTGTAAACCTCTTTTGTTAGGGAGCGTGTACCTTTCGAATAAGCACCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTAGGCGGTTCGTCGCGTCCGGTGTGAAGT-CCATCGCTTAACGGTGGATCCGCGCCGGGTACGGGCGGGCTTGAGTGCGGTAGGGGAGACTGGAATTCCCGGTGTAACGGTGGAATGTGTAGATATCGGGAAGAACACCAATGGCGAAGGCAGGTCTCTGGGCCGT-ACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGATGCTGGATGTGGGGCCGTGTCGGAGCTAACGCGTTAAGCATCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGAAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGCTTGACATGCAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCCCGTGTTGCAACTCACGGGGGACCGCCGGGGTTAACTCGGAGGAAGGTGGGGATGACGTCAGATCATCATG-CCCTTACGTCCAGGGCTTCACGCATGCTACAATGGCCGGTACAACGGGATGCGACAGTGCGAGCTGGAGCGGATCCCTGAAAACCGGTCTCAGTTCGGATCGCAGTCTGCAACTCGACTGCGTGAAGGCGGAGTCGCTAGTAATCGCGAATCAGCACGTCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGTGGGCAGCACCCGAAGCCGGCGTCTAAGGTGAGGCTCGTGATTGGGACTAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
79 >484296 study_id=40682 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
80 GATGAACGCTGGCGGCGCGCCTAACACATGCAAGTCGAAC-GAGTGGCGAACGGCTGAGTAACACGTGGGCAACCTGCCCTCCTCTTGGGGATAGCCTCGGGAAACCGAGGATAATACCCGATAGAGAAGGATGGGCCCGCGGCCTGTTAGCTTGTTGGTGGGGTAGAGGCT-ACCAAGGC-ATGATGGGTAGCTGGGTTGAGAGACCGACCAGCCAGATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGACGAAGGCCTTCGGGTTGTAAACCGCTTTCAGCAGGGACGCGGTACCTGCAGAAGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCTCGTAGGCGGTCTGTTAGGTCGGGAGTTAATC-CGGAGGCTCAACCTCCG-CCCGCTCCCGATACCGGCAGACTTGAGTTTGGTAGGGGAAGGTGGAATTCCTAGTGTAGCGGTGGAATGCGCAGATATTAGGAAGAACACCAGTGGCGAAGGCGGCCTTCTGGGCCAA-ACTGACGCTGAGGAGCGAAAGCTAGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCTAGCTGTAAACGATGGACACTAGGTGTGGGACCGTGCCGCAGCTAACGCATTAAGTGTCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGCGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGCAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTAGGTTAAGTCCTGCAACGAGCGCAACCCTCGTCGTATATTGCCACCTATACGAGACCGCCGGCGTCAAGCCGGAGGAAGGTGGGGACGACGTCAAGTCATCATG-CCCTTATGTCCTGGGCTACACACGTGCTACAATGGCCGGCACAATGAGCTGCCAACCCGCAAGGGCGAGCGAATCTC-TAAAGCCGGTCCCAGTTCGGATTGGAGGCTGCAACCCGCCTCCATGAAGTCGGAGTTGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATGCGTTCCCGGGTCTTGTACACACCGCCCGTCACACCACCCGAGTCGATTGCACCCGAAGTCGTCGCCGAAGGTGTGGTTGGTAAGGGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
81 >484294 study_id=33866 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
82 GATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGAAGTGGCGGACGGGTGAGTAACGCGTGGGGAACCTGCCCTATACAGGGGGATAACAGCTGGAAACGGCTGCTAATACCGCATAGTATAGGATGGTCCCGCGTCTGATTAGCTGGTTGGTGAGGTAACGGCTCACCAAGGCGACGATCAGTAGCCGGCTTGAGAGAGTGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGCGGTACCTGACTAAGAAGCCCCGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTAGGTGGCATGGTAAGTCAGAAGTGAAAGCCCGGGGCTTAACCCCGGGACTGCTTTTGAAACTGTCATGCTGGAGTGCAGGAGAGGTAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTACTGGACTGTCACTGACACTGATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGCGGTGCCGCAGCAAACGCAGTAAGTATTCCACCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGGTCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCTTTAGTAGCCACTCTAGAGAGACTGCCAGGGATAACCTGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGGCCAGGGCTACACACGTGCTACAATGGCGTAAACAAAGGGAAGCGAAGTCGTGAGGCGAAGCAAATCCCAGAAATAACGTCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGTGAATCAG-ATGTCACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTCAGTAACGCCCGAAGTCAG.................................................. |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
83 >471785 study_id=37997 non_ACGT_percent=0.0000 decision=symbiont |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
84 ..........GGCGGCAGGCCTAACACATGCAAGTCGAGCG-AGCGGCGGACGGGTGAGTAATGTCTGGGG-ATCTGCCCGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATACCATCGGATGAACCCAGATGGGATTAGCTAGTAGGTGGGGTAATGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGCGGGGAGGCGTTACCCGCAGAAGAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTACGCAGGCGGTCTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTTGAAACTGGCAGGCTAGAGTCTCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGACTGACGCTCAGGTACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCGATTTGAAGGTTGTGGCTTTCGGAGCTAACGCGTTAAATCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTTGCAACTCAAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGATCTCGCGAGAGTCAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAG-ATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTTACCACTTTGTGATTCATGACTGGGGTG..................... |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
85 >471528 study_id=37895 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
86 .........................ACATGCAAGTCGAGCGCAGCGGCAGACGGGTGAGTAACGCGTGGGA-ATCTACCCATCTCTACGGAACAACTCCGGGAAACTGGAGCTAATACCGTATAGAGATGGATGAGCCCGCGTTGGATTAGCTAGTTGGTGGGGTAATGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCCTAGGGTTGTAAAGCTCTTTCAACGGTGAAGCGGTAACCGTAGAAGAAGCCCCGGCTAAC-TTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATACTTAAGTCAGGGGTGAAATCCCGGGGCTCAACCCCGGAACTGCCTTTGATACTGGGTATCTCGAGTCCGGAAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGCGGCTCACTGGTCCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGAAGCTAGCCGTTGGCCGGTGGCGCAGCTAACGCATTAAGCTTCCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCCCTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCCTTAGTTGCCACTCTAAGGGGACTGCCGGTGATAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGTGGTGACAGTGGGCAGCGAGACCGCGAGGTCGAGCTAATCTCC-AAAAGCCATCTCAGTTCGGATTGCACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGGTTTTACCCGAAGGCGC.................................................. |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
87 >471521 study_id=37891 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
88 ..........................................AGCGGGG-ACGGGTGAGTAACACGTGGGTAACCTCCT-ATAAGACTGGGATAACTCCGGGAAACCGGGGCTAAACCGG-ATACTTATAGATGGACCCGCGCCGTATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATACGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTGTTAGGGAAGCGGTACCTAACCAGAAAGCCACGGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTCTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAG-GGCATTGGAAACTGGGAAACTTGAGTGCAGAAGAGGAGAGTGGAATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGGCTCTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGTAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCACTCTAGGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGATAATACAAAGGGCAGCGAT-CCGCGAGGCCAAGCAAATCCCATAAAATTATTCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTTGTAACACCCGAAGCCGG.................................................. |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
89 >471518 study_id=37888 non_ACGT_percent=0.0696 decision=clone |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
90 ................GTGCCTAATACATGCAAGTTGAGCGCAGCAGCGAACGGGTGAGTAACGCGTGGGGAAC-TGCCTTTGAGCGGGGGACAACATTTGGAAACGAATGCTAATACCGCATACTCAAAGATGATCCCGCGTTGTATTAGCTAGTTGGTGAGGTAAAGGCTCACCAAGGCGATGATACATAGCCGACCTGAGAGGGTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAACTCTGTTGGTAGAGAAGCGGTAACTACCCAGAAAGGGACGGCTAAC-TACGTGCCAGCAGCCCGGGTAATACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGTGGTTTATTAAGTCTGGTGTAAAAGGCAGTGGCTCAACCATTGTA-TGCATTGGAAACTGGTAGACTTGAGTGCAGGAGAGGAGAGTGGAATTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAAGCGGCTCTCTGGCCTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGATGTAGG-CTGTATCGCAGCTAACGCAATAAGCACTCGCCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTGGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTGTTAGTTGCCACTCTAACGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGATGGTACAACGAGTCGCGAGACAGTGATGTTTAGCTAATCTCTTAAAACCATTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGAAGTTGGGAGTACCCGAAGTAGGTTCCTAAGGTAA...................................... |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
91 >471517 study_id=37887 non_ACGT_percent=0.0000 decision=clone |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
92 ATTGAACGCTGGCGGTATGCTTAACACATGCAAGTCGAACG-AGTGGCGGACGGGTGAGTAACGCGTAGGA-ATCTGCCTGATAGTGGGGGATAGCCCGAAGAAATTCGGATTAATACCGCATACTATCAGATGAGCCTGCGTAAGATTAGCTTGTTGGTAGGGTAAAAGCCTACCAAGGCGACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCACATCGGGACTGAGACACGGCCCGAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGCGTTAACTTTAGAAGAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGTAGGCGGTTTATTAAGTCAGATGTGAAAGCCCCGGGCTTAACCTGGGAACTGCATTTGAAACTGGTCAACTAGAGTATGGTAGAGGAAAGTGGAATTTCTGGTGTAGCGGTGAAATGCGTAGATATCAGAAGGAACATCAATGGCGAAGGCAGCTTTCT-GACCAATACTGACGCTGAGGTACGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAACTAGCCGTTGGGTAGTGGCGAAGCTAACGCGTTAAGTTATCCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATCCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCCTATCCTTATTTGCAACTATAAGGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGAAGGACAAAGAGCCGC-AAGCCGCGAGGTGTAGCTAATCTCATAAACCTTTTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTAGATCAGA--GCTACGGTGAATACGTTCCCGGGTCTTGTACACACCGCC...................................................................................... |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
93 >471516 study_id=37887 non_ACGT_percent=0.0000 decision=clone |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
94 .TTGAACGCTGGCGGTATGCTTAACACATGCAAGTCGAACG-AGTGGCGGACGGGTGAGTAACGCGTAGGA-ATCTACCTAATAGTGGGGGATAGCCCAGAGAAATCTGGATTAATACCGCATACTATCAGATGAGCCTGCGTAAGATTAGCTAGTTGGTGAGGTAAAAGCTCACCAAGGCGACGATCTTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCAATACCGCGTGTGTGAAGAAGGCCTGAGGGTTGTAAAGCACTTTCAATTGTGAAGCGTTAACTTTAGAAGAAGCACCGGCTAAC-TCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGTAGGTGGTTTGTTAAGTTAGATGTGAAAGCCCTGGGCTCAACCTAGGAACTGCATTTAAAACTGGCAAACTAGAGTATAGGAGAGGAAAGTGGAATTTCAGGTGTAGCGGTGAAATGCGTAGATATCTGAAGGAACATCAATGGCGAAGGCAGCTTTCTGGACTAATACTGACACTGAGGTACGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGACAACTAGCCGTTGGGTAGTGGCGAAGCTAACGCGTTAAGTTGTCCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTATCCTTATTTGCAACTATAAGGAGACTGCCGGTGATAAACCGGAGGAAGGCGGGGACGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGGAAGGACAAAGGGTTGCTAAGCCGCGAGGTGGTGCTAATCTCATAAACCTTTTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAG-ACGCCACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTC.................................................................................. |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
95 >471515 study_id=37886 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
96 AACGAACGTTAGCGGCGCGCTTAACACATGCAAGTCGAGCGAAGCGGCGCACGGGTGAGTAACACGTAGGTAATCTGCCCCCAGGTGGTGGATAACGTTCCGAAAGGAGCGCTAATACAGCATGCCGGGG-ATGAGCCTGCGGCCCATCAGCTAGTTGGTAGGGTAATGGCCTACCAAGGCGAAGACGGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGAGTGATGAAGGCCTTCGGGTTGTAAAGCTCTGTGGAGGGGGACGCGGTACCCCTTTAGCAAGCACCGGCTAAC-TCTGTGCCAGCAGCCGCGGTAAGACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTAGGCGGTTCTAAA-GTC-AGTGTGAAAGCCCTGGGCTTAACCCAGGAAGTGCA-CTGAAACTACGAA-CTTGAGTCCCGGAGAGGAAGGCGGAATTCTCGGTGTAGAGGTGAAATTCGTAGATATCGAGAGGAACATCGGTGGCGAAGGCGGCCTTCTGGACGGTGACTGACGCTGAGACGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGGTGCTAGGTGC-GCGCGGTGCCGTAGCTAACGCATTAAGCACCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTCAATTCGACGCAACGCGCAGAACCTTACCTGGGCTAGAAAATTAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCGTTAGTTGCCACTCTAGCGAGACTGCCGATTTTAAATCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGTCCAGGGCTACACACGTGCTACAATGGGCGGTACAGACGGTCGCGAACCCGCGAGGGAA-GCCAATCCGAAAAAACCGTCCTCAGTACGGATAAGAGTCTGCAACTCGACTCTTTGAAGTTGGAATCGCTAGTAATCCCTGATCAGCAGGCAGGGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCGATTGCTCCAGAAGTGGCCCCCCAAGGAGTGGTTGGTAACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
97 >471514 study_id=37886 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
98 AACGAACGTTAGCGGCGCGCTTAACACATGCAAGTCGAGCGAAGCGGCGCACGGGTGAGTAACACGTAGGTAATCTGCCCCCAGGTGGTGGATAACGTTCCGAAAGGAGCGCTAATACAGCATGCCGGGG-ATGAGCCTGCGGCCCATCAGCTAGTTGGTAGGGTAATGGCCTACCAAGGCGAAGACGGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGAGTGATGAAGGCCTTCGGGTTGTAAAGCTCTGTGGAGGGGGACGCGGTACCCCTTTAGCAAGCACCGGCTAAC-TCTGTGCCAGCAGCCGCGGTAAGACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTAGGCGGTTCTAAA-GTC-AGTGTGAAAGCCCTGGGCTTAACCCAGGAAGTGCA-CTGAAACTACGAA-CTTGAGTCCCGGAGAGGAAGGCGGAATTCTCGGTGTAGAGGTGAAATTCGTAGATATCGAGAGGAACATCGGTGGCGAAGGCGGCCTTCTGGACGGTGACTGACGCTGAGACGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGGTGCTAGGTGC-GCGCGGTGCCGTAGCTAACGCATTAAGCACCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAACCGGTGGAGCATGTGGTTCAATTCGACGCAACGCGCAGAACCTTACCTGGGCTAGAAAATTAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCGTTAGTTGCCACTCTAGCGAGACTGCCGATTTTAAATCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGTCCAGGGCTACACACGTGCTACAATGGGCGGTACAGACGGTCGCGAACCCGCGAGGGAA-GCCAATCCGAAAAAACCGTCCTCAGTACGGATAAGAGTCTGCAACTCGACTCTTTGAAGTTGGAATCGCTAGTAATCCCTGATCAGCAGGCAGGGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCGATTGCTCCAGAAGTGGCCCCCCAAGGAGTGGTTGGTAACTGGGGTGAAGTCGTAACAAGGTAGCCGT |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
|
99 >471513 study_id=37886 non_ACGT_percent=0.0000 decision=named_isolate |
|
614a12d56e58
planemo upload for repository https://github.com/sanbi-sa/tools-sanbi-uwc/tree/master/tools/fasttree commit 4db125fcd73327813d7bd511852bbe9ffc68a25c
sanbi-uwc
parents:
diff
changeset
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100 AACGAACGTTAGCGGCGCGCTTAACACATGCAAGTCGAGCGAAGCGGCGCACGGGTGAGTAACACGTAGGTAATCTGCCCCCAGGTGGTGGATAACGTTCCGAAAGGAGCGCTAATACAGCATGCCGGGG-ATGAGCCTGCGGCCCATCAGCTAGTTGGTAGGGTAATGGCCTACCAAGGCGAAGACGGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGAGTGATGAAGGCCTTCGGGTTGTAAAGCTCTGTGGAGGGGGACGCGGTACCCCTTTAGCAAGCACCGGCTAAC-TCTGTGCCAGCAGCCGCGGTAAGACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTAGGCGGTTCTAAA-GTC-AGTGTGAAAGCCCTGGGCTTAACCCAGGAAGTGCA-CTGAAACTACGAA-CTTGAGTCCCGGAGAGGAAGGCGGAATTCTCGGTGTAGAGGTGAAATTCGTAGATATCGAGAGGAACATCGGTGGCGAAGGCGGCCTTCTGGACGGTGACTGACGCTGAGACGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGGTGCTAGGTGC-GCGCGGTGCCGTAGCTAACGCATTAAGCACCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTCAATTCGACGCAACGCGCAGAACCTTACCTGGGCTAGAAAATTAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCGTTAGTTGCCACTCTAGCGAGACTGCCGATTTTAAATCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGTCCAGGGCTACACACGTGCTACAATGGGCGGTACAGACGGTCGCGAACCCGCGAGGGAA-GCCAATCCGAAAAAACCGTCCTCAGTACGGATAAGAGTCTGCAACTCGACTCTTTGAAGTTGGAATCGCTAGTAATCCCTGATCAGCAGGCAGGGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCGATTGCTCCAGAAGTGGCCCCCCAAGGAGTGGTTGGTAACTGGGGTGAAGTCGTAACAAGGTAGCCGT |