Mercurial > repos > sanbi-uwc > data_manager_novocraft_index_builder

view data_manager_conf.xml @ 10:68b7023c6a2f draft

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planemo upload for repository https://github.com/zipho/data_manager_novocraft_index_builder commit 41c23255d958406b015574dd15b07d44175a2c1b
author sanbi-uwc
date Sat, 05 Mar 2016 10:29:02 -0500
parents 810d5013fdc2
children a9b725202132
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<?xml version="1.0" encoding="utf-8" ?>
<data_managers>
    <data_manager tool_file="data_manager/novocraft_index_builder.xml" id="novocraft_index_builder" version="0.0.1">
        <data_table name="novocraft_index">
            <output>
                <column name="value" />
                <column name="dbkey" />
                <column name="name" />
                <column name="path" output_ref="out_file">
                    <move type="file">
                        <!--<move type="directory" relative_symlinks="True"> -->
                        <!-- no need to set source, gets taken from out_dir.extra_files_path -->
                         <source>${path}</source> <!-- File name within the extra files path -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/novocraft_index/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/{$dbkey}/novocraft_index/${value}/${path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>