Mercurial > repos > sanbi-uwc > data_manager_novocraft_index_builder

diff data_manager/novocraft_index_builder.py @ 6:8dd4b25716d1 draft

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planemo upload for repository https://github.com/zipho/data_manager_novocraft_index_builder commit 05004076adb510abc08f6c1e28ba22b2c1a29534
author sanbi-uwc
date Sat, 05 Mar 2016 07:55:06 -0500
parents b7c01f1d6451
children d04a59b76845
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line diff
--- a/data_manager/novocraft_index_builder.py	Sat Mar 05 07:05:30 2016 -0500
+++ b/data_manager/novocraft_index_builder.py	Sat Mar 05 07:55:06 2016 -0500
@@ -14,7 +14,7 @@
 
 from json import loads, dumps
 
-DEFAULT_DATA_TABLE_NAME = "novocraft_indexes"
+DEFAULT_DATA_TABLE_NAME = "novocraft_index"
 
 def get_dbkey_id_name(params, dbkey_description=None):
     dbkey = params['param_dict']['dbkey']
@@ -81,7 +81,7 @@
     parser = argparse.ArgumentParser(description="Generate Novo-align genome index and JSON describing this")
     parser.add_argument('output_filename')
     parser.add_argument('--dbkey_description')
-    parser.add_argument('--data_table_name', default='novocraft_indexes')
+    parser.add_argument('--data_table_name', default='novocraft_index')
     args = parser.parse_args()
 
     filename = args.output_filename