# HG changeset patch
# User sanbi-uwc
# Date 1457080868 18000
# Node ID 028bec15ea717f6aacb3b7dcc6f1962b13c38aa3
# Parent  db05a35d61ee5026022acaeb7cf11604131e7757
planemo upload for repository https://github.com/zipho/data_manager_novoalign_index_builder commit a3874e6906be1af7282d62394e1900856190354e-dirty

diff -r db05a35d61ee -r 028bec15ea71 data_manager_conf.xml
--- a/data_manager_conf.xml	Fri Mar 04 03:11:32 2016 -0500
+++ b/data_manager_conf.xml	Fri Mar 04 03:41:08 2016 -0500
@@ -6,15 +6,15 @@
                 <column name="value" />
                 <column name="dbkey" />
                 <column name="name" />
-                <column name="path" output_ref="out_dir">
-                    <move type="directory" relative_symlinks="True">
-                        <!-- no need to set source, gets taken from out_dir.extra_files_path -->
-                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/novocraft_index/${value}</target>
+                <column name="path" output_ref="out_file" >
+                    <move type="file">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/novocraft_index/${path}</target>
                     </move>
-                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/{$dbkey}/novocraft_index/${value}/${path}</value_translation>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/novocraft_index/${path}</value_translation>
                     <value_translation type="function">abspath</value_translation>
                 </column> 
             </output>
-        </data_table>
+        </data_table> 
     </data_manager>
 </data_managers>