# HG changeset patch # User sanbi-uwc # Date 1536363185 14400 # Node ID f992a51def8d2b8e68db4e8eecb26a666c1fdc2b # Parent efe0f451c40f357268c8e353b7539abeced0b387 planemo upload for repository https://github.com/pvanheus/refseq_fasta_data_manager commit b682adad2c3c74567d23e1a5cf2bfcc3df1c96ae-dirty diff -r efe0f451c40f -r f992a51def8d data_manager/fetch_refseq.xml --- a/data_manager/fetch_refseq.xml Fri Sep 07 19:00:00 2018 -0400 +++ b/data_manager/fetch_refseq.xml Fri Sep 07 19:33:05 2018 -0400 @@ -1,4 +1,4 @@ - + Fetch FASTA data from NCBI RefSeq and update all_fasta data table python diff -r efe0f451c40f -r f992a51def8d data_manager_conf.xml --- a/data_manager_conf.xml Fri Sep 07 19:00:00 2018 -0400 +++ b/data_manager_conf.xml Fri Sep 07 19:33:05 2018 -0400 @@ -9,9 +9,9 @@ ${path} - ${dbkey}/seq/${path} + refseq/${dbkey}/os.path.basename(${path}) - ${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/seq/${path} + ${GALAXY_DATA_MANAGER_DATA_PATH}/refseq/${dbkey}/os.path.basename(${path}) abspath