# HG changeset patch
# User sanbi-uwc
# Date 1536365644 14400
# Node ID 45baee31ca39bbb5b46df42bae9ce279c89c01ad
# Parent  b1e8f8a613e69f9981c022a4253efbacc8442ee3
planemo upload for repository https://github.com/pvanheus/refseq_fasta_data_manager commit b682adad2c3c74567d23e1a5cf2bfcc3df1c96ae-dirty

diff -r b1e8f8a613e6 -r 45baee31ca39 data_manager/fetch_refseq.py
--- a/data_manager/fetch_refseq.py	Fri Sep 07 20:07:55 2018 -0400
+++ b/data_manager/fetch_refseq.py	Fri Sep 07 20:14:04 2018 -0400
@@ -147,7 +147,7 @@
             today_str = date.today().strftime('%Y-%m-%d') # ISO 8601 date format
         [release_num, fasta_files] = get_refseq_division(division_name, mol_types, output_directory, args.debug, args.compress)
         if args.galaxy_datamanager_filename is not None:
-            for i,  mol_type in enumerate(args.mol_types):
+            for i, mol_type in enumerate(mol_types):
                 assert mol_type in fasta_files[i], "Filename does not contain expected mol_type ({}, {})".format(mol_type, fasta_files[i])
                 unique_key = division_name + '.' + release_num + '.' + mol_type + '.' + today_str
                 dbkey = division_name + '.' + release_num + '.' + mol_type
diff -r b1e8f8a613e6 -r 45baee31ca39 data_manager/fetch_refseq.xml
--- a/data_manager/fetch_refseq.xml	Fri Sep 07 20:07:55 2018 -0400
+++ b/data_manager/fetch_refseq.xml	Fri Sep 07 20:14:04 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.12" tool_type="manage_data">
+<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.13" tool_type="manage_data">
     <description>Fetch FASTA data from NCBI RefSeq and update all_fasta data table</description>
     <requirements>
         <requirement type="package" version="3">python</requirement>