Mercurial > repos > sanbi-uwc > data_manager_fetch_refseq
view data_manager_conf.xml @ 6:7226cda27b03 draft
planemo upload for repository https://github.com/pvanheus/refseq_fasta_data_manager commit b682adad2c3c74567d23e1a5cf2bfcc3df1c96ae-dirty
author | sanbi-uwc |
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date | Fri, 07 Sep 2018 19:39:10 -0400 |
parents | f992a51def8d |
children | efdead58e937 |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/fetch_refseq.xml" id="fetch_genome_fetch_refseq"> <data_table name="all_fasta"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="output_file" > <move type="file"> <source>${path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">refseq/${dbkey}/os.path.basename(${path})</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/refseq/${dbkey}/os.path.basename(${path})</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>