diff data_manager/fetch_refseq.py @ 11:b1e8f8a613e6 draft

planemo upload for repository https://github.com/pvanheus/refseq_fasta_data_manager commit b682adad2c3c74567d23e1a5cf2bfcc3df1c96ae-dirty

--- a/data_manager/fetch_refseq.py	Fri Sep 07 20:03:30 2018 -0400
+++ b/data_manager/fetch_refseq.py	Fri Sep 07 20:07:55 2018 -0400
@@ -127,11 +127,11 @@
     parser.add_argument('--compress', default=False, action='store_true', help='Compress output files')
     parser.add_argument('--output_directory', default='tmp', help='Directory to write output to')
     parser.add_argument('--galaxy_datamanager_filename', help='Galaxy JSON format file describing data manager inputs')
-    parser.add_argument('--division_names', nargs='+', help='RefSeq divisions to download')
-    parser.add_argument('--mol_types', nargs='+', help='Molecule types (genomic, rna, protein) to fetch')
+    parser.add_argument('--division_names', help='RefSeq divisions to download')
+    parser.add_argument('--mol_types', help='Molecule types (genomic, rna, protein) to fetch')
     parser.add_argument('--pin_date', help='Force download date to this version string')
     args = parser.parse_args()
-    
+
     division_names = args.division_names.split(',')
     mol_types = args.mol_types.split(',')
     if args.galaxy_datamanager_filename is not None: