Mercurial > repos > sanbi-uwc > data_manager_fetch_artic_primers

annotate data_manager_conf.xml @ 3:6114f017f819 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
author sanbi-uwc
date Fri, 17 Apr 2020 11:42:59 +0000
parents 119f459fc35f
children
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c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
1 <?xml version="1.0"?>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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2 <data_managers>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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3 <data_manager tool_file="data_manager/fetch_artic_primers.xml" id="fetch_artic_primers">
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
4 <data_table name="artic_primers">
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
5 <output>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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6 <column name="value" />
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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7 <column name="description" />
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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8 <column name="path" output_ref="output_file" >
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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9 <move type="file">
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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10 <source>${path}</source>
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119f459fc35f "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents: 1
diff changeset
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">artic_primers/#echo str($value)#.bed</target>
0
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
12 </move>
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119f459fc35f "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents: 1
diff changeset
13 <value_translation>artic_primers/#echo str($value)#.bed</value_translation>
0
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
14 <value_translation type="function">abspath</value_translation>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
15 </column>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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16 </output>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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17 </data_table>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
diff changeset
18 </data_manager>
c401f63b3d12 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"
sanbi-uwc
parents:
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19 </data_managers>