# HG changeset patch
# User sanbi-uwc
# Date 1463988977 14400
# Node ID 4864d5866418c46da0309654e684763847f61b14
# Parent  3995dfb6b4974d6274ed600580735960b319b495
planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc.git commit 4e7d0d81a4ac02a0fcc5bb81d61559476df1086c

diff -r 3995dfb6b497 -r 4864d5866418 build_ctb_gene.py
--- a/build_ctb_gene.py	Sun May 22 15:34:49 2016 -0400
+++ b/build_ctb_gene.py	Mon May 23 03:36:17 2016 -0400
@@ -8,7 +8,6 @@
 import shutil
 import datetime
 import time
-import random
 from subprocess import check_call, check_output, CalledProcessError
 
 import logging
@@ -99,14 +98,8 @@
 
 def main():
     parser = argparse.ArgumentParser(description="Tool used to extract data about genes using locus_tags")
-    # parser.add_argument('--outputfile')
     parser.add_argument('--outputdir')
     parser.add_argument('--input_file')
-    # parser.add_argument('--mount_point')
-    # parser.add_argument('--username')
-    # parser.add_argument('--password')
-    # parser.add_argument('--url')
-    # parser.add_argument('--port')
     args = parser.parse_args()
 
     ctb_gene_runner = BuildCtbRunner(args)
diff -r 3995dfb6b497 -r 4864d5866418 build_ctb_gene.xml
--- a/build_ctb_gene.xml	Sun May 22 15:34:49 2016 -0400
+++ b/build_ctb_gene.xml	Mon May 23 03:36:17 2016 -0400
@@ -13,13 +13,6 @@
     </command>
     <inputs>
         <param name="input_file" type="data" format="gff" label="Choose the GFF file" help="Specify the GFF file" optional="False" />
-        <!--<param type="text" name="neo4j_data_mount_point" value="" label="Neo4j data mount point" place-holder="/mnt/neo4j/data/lib" optional="False" /> -->
-        <!--<section name="db_settings" title="Neo4j Backend Database Settings" expanded="True">
-            <param type="text" name="neo4j_db_url" value="" label="Neo4j database URL" optional="False" />
-            <param type="text" name="neo4j_db_port" value="" label="Neo4j database port" optional="False" />
-            <param type="text" name="neo4j_db_username" value="" label="Neo4j database username" optional="False" />
-            <param type="text" name="neo4j_db_password" value="" label="Neo4j database password" optional="False" />
-        </section>-->
     </inputs>
     <outputs>
         <data format="neostore" name="outputFile1"/>