Mercurial > repos > sanbi-uwc > build_ctb_gene

diff build_ctb_gene.py @ 6:03ca4e5a3682 draft

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planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc.git commit 7fa283bb29cd154e974894b279265cf43881bccd
author sanbi-uwc
date Mon, 16 May 2016 04:53:09 -0400
parents 6098213127d7
children d89a58d00a92
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--- a/build_ctb_gene.py	Mon May 16 04:38:00 2016 -0400
+++ b/build_ctb_gene.py	Mon May 16 04:53:09 2016 -0400
@@ -41,7 +41,7 @@
 def main():
     parser = argparse.ArgumentParser(description="Generate a BAM file from the Novo Align tool")
     parser.add_argument('output_file1')
-    parser.add_argument('output_dir')
+    parser.add_argument('--output_dir')
     parser.add_argument('--input_file')
     parser.add_argument('--mount_point')
     parser.add_argument('--username')