Mercurial > repos > sanbi-uwc > build_ctb_gene
comparison build_ctb_gene.py @ 15:e6d850bb9fb6 draft
planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc.git commit c78b1532031ee875ff51cb2a4c73f4577bd07839
author | sanbi-uwc |
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date | Wed, 18 May 2016 08:28:36 -0400 |
parents | 4caf3e2d10e8 |
children | eb925a043a43 |
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14:4caf3e2d10e8 | 15:e6d850bb9fb6 |
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53 shutil.copy(file_name, self.args.outputdir) | 53 shutil.copy(file_name, self.args.outputdir) |
54 | 54 |
55 | 55 |
56 def main(): | 56 def main(): |
57 parser = argparse.ArgumentParser(description="Tool used to extract data about genes using locus_tags") | 57 parser = argparse.ArgumentParser(description="Tool used to extract data about genes using locus_tags") |
58 parser.add_argument('--outputfile') | |
58 parser.add_argument('--outputdir') | 59 parser.add_argument('--outputdir') |
59 parser.add_argument('--input_file') | 60 parser.add_argument('--input_file') |
60 parser.add_argument('--mount_point') | 61 parser.add_argument('--mount_point') |
61 parser.add_argument('--username') | 62 parser.add_argument('--username') |
62 parser.add_argument('--password') | 63 parser.add_argument('--password') |