Mercurial > repos > saketkc > polyphen2

annotate polyphen2_web/test-data/polyphen2_log.txt @ 1:1cbb0f884e7c draft

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author saketkc
date Mon, 14 Apr 2014 17:30:34 -0400
parents b319f980c9e6
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1 ===========================
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2 Stage 1/7: Validating input
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3 ===========================
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4 No errors
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5
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6 ===============================
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7 Stage 2/7: Mapping genomic SNPs
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8 ===============================
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9 WARNING: (chr22:40814500 - uc003ayv.1) None of the input alleles (A/G) matches reference allele (T)
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10 WARNING: (chr22:40814500 - uc003ayw.1) None of the input alleles (A/G) matches reference allele (T)
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11 WARNING: (chr22:40814500 - uc010gye.1) None of the input alleles (A/G) matches reference allele (T)
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12 WARNING: (chr22:40814500 - uc010gyf.1) None of the input alleles (A/G) matches reference allele (T)
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13 Total errors/warnings: 4
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14
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15 ============================
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16 Stage 3/7: Collecting output
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17 ============================
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18 No errors
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19
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20 ===============================================
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21 Stage 4/7: Building MSA and annotating proteins
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22 ===============================================
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23 No errors
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24
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25 ============================
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26 Stage 5/7: Collecting output
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27 ============================
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28 No errors
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29
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30 =====================
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31 Stage 6/7: Predicting
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32 =====================
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33 No errors
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34
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35 =============================
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36 Stage 7/7: Generating reports
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37 =============================
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38 No errors