annotate polyphen2_web/README.rst @ 1:1cbb0f884e7c draft

Uploaded
author saketkc
date Mon, 14 Apr 2014 17:30:34 -0400
parents b319f980c9e6
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
1 Galaxy wrapper for the Polyphen2 webservice
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
2 ===================================================
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
3
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
4 This tool is copyright 2014 by Saket Choudhary<saketkc@gmail.com>, Indian Institute of Technology Bombay
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
5 All rights reserved. MIT licensed.
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
6
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
7 Licence (MIT)
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
8 =============
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
9
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
10 Permission is hereby granted, free of charge, to any person obtaining a copy
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
11 of this software and associated documentation files (the "Software"), to deal
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
12 in the Software without restriction, including without limitation the rights
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
13 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
14 copies of the Software, and to permit persons to whom the Software is
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
15 furnished to do so, subject to the following conditions:
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
16
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
17 The above copyright notice and this permission notice shall be included in
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
18 all copies or substantial portions of the Software.
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
19
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
20 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
21 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
22 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
23 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
24 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
25 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
26 THE SOFTWARE.
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
27
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
28 Citations
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
29 ===========
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
30
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
31
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
32 If you use this Galaxy tool in work leading to a scientific publication please cite:
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
33
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
34 Adzhubei IA, Schmidt S, Peshkin L, Ramensky VE, Gerasimova A, Bork P, Kondrashov AS, Sunyaev SR. Nat Methods 7(4):248-249 (2010).
b319f980c9e6 Uploaded
saketkc
parents:
diff changeset
35 "A method and server for predicting damaging missense mutations."