annotate tools/mutationassesor_web/README.rst @ 1:3fe64fec66e4

tag
author Saket Choudhary <saketkc@gmail.com>
date Wed, 20 Nov 2013 01:43:30 +0530
parents 32e3e166ced7
children eae0427d25d6
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
1 Galaxy wrapper for the CHASM webservice at CRAVAT(v2.0)
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
2 ===================================================
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
3
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
4 This tool is copyright 2013 by Saket Choudhary, Indian Institute of Technology Bombay
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
5 All rights reserved. MIT licensed.
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
6
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
7 Licence (MIT)
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
8 =============
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
9
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
10 Permission is hereby granted, free of charge, to any person obtaining a copy
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
11 of this software and associated documentation files (the "Software"), to deal
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
12 in the Software without restriction, including without limitation the rights
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
13 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
14 copies of the Software, and to permit persons to whom the Software is
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
15 furnished to do so, subject to the following conditions:
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
16
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
17 The above copyright notice and this permission notice shall be included in
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
18 all copies or substantial portions of the Software.
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
19
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
20 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
21 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
22 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
23 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
24 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
25 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
26 THE SOFTWARE.
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
27
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
28 Citations
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
29 ===========
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
30
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
31
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
32 If you use this Galaxy tool in work leading to a scientific publication please cite:
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
33
32e3e166ced7 Initial
Saket Choudhary <saketkc@gmail.com>
parents:
diff changeset
34 Reva B, Antipin Y, Sander C. Nucleic Acids Research (2011) "Predicting the Functional Impact of Protein Mutations: Application to Cancer Genomics"