Mercurial > repos > saketkc > condel
view condel_web/test-data/condel_output.csv @ 5:84247b644a7d draft
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author | saketkc |
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date | Mon, 14 Apr 2014 21:37:22 -0400 |
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#id location allele gene hgnc hgncdesc transcript ensp sw protein_position amino_acids uploaded_variation cdna_position cds_position codons existing_variation sift polyphen mass condel condelLabel 19 7:38471790 A ENSG00000078053 AMPH amphiphysin ENST00000428293 ENSP00000390734 NA 386 T/M 7_38471790_A 1226 1157 aCg/aTg COSM53413 0.01 0.998 NA 0.880 deleterious 17 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000447717 ENSP00000402803 NA 82 L/R 7_43918688_C 762 245 cTc/cGc COSM53414 0.05 0.995 NA 0.803 deleterious 18 6:88372821 A ENSG00000135336 ORC3 origin recognition complex, subunit 3 ENST00000546266 ENSP00000444695 NA 455 A/T 6_88372821_A 1720 1363 Gcc/Acc COSM53412 0.01 0.93 NA 0.782 deleterious 15 6:88372821 A ENSG00000135336 ORC3 origin recognition complex, subunit 3 ENST00000392844 ENSP00000376586 ORC3_HUMAN 598 A/T 6_88372821_A 1840 1792 Gcc/Acc COSM53412 0.01 0.93 1.95 0.782 deleterious 16 6:88372821 A ENSG00000135336 ORC3 origin recognition complex, subunit 3 ENST00000452292 ENSP00000411130 NA 536 A/T 6_88372821_A 1615 1606 Gcc/Acc COSM53412 0.01 0.266 NA 0.032 neutral 13 5:41934236 G ENSG00000151876 FBXO4 F-box protein 4 ENST00000509134 ENSP00000421749 NA 242 K/E 5_41934236_G 733 724 Aag/Gag COSM53411 0.68 0.01 NA 0.001 neutral 14 5:41934236 G ENSG00000151876 FBXO4 F-box protein 4 ENST00000281623 ENSP00000281623 FBX4_HUMAN 242 K/E 5_41934236_G 780 724 Aag/Gag COSM53411 0.76 0.001 0 0.000 neutral 11 9:32473058 A ENSG00000107201 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 ENST00000379882 ENSP00000369212 NA 598 L/F 9_32473058_A 1952 1794 ttA/ttT COSM53415 0.01 0.96 NA 0.808 deleterious 12 5:41934236 G ENSG00000151876 FBXO4 F-box protein 4 ENST00000296812 ENSP00000296812 NA 242 K/E 5_41934236_G 780 724 Aag/Gag COSM53411 0.67 0.01 NA 0.001 neutral 21 7:38471790 A ENSG00000078053 AMPH amphiphysin ENST00000353242 ENSP00000342268 NA 156 T/M 7_38471790_A 1226 467 aCg/aTg COSM53413 0 0.983 NA 0.929 deleterious 20 7:38471790 A ENSG00000078053 AMPH amphiphysin ENST00000356264 ENSP00000348602 AMPH_HUMAN 386 T/M 7_38471790_A 1373 1157 aCg/aTg COSM53413 0.01 0.998 1.79 0.880 deleterious 22 6:88372821 A ENSG00000135336 ORC3 origin recognition complex, subunit 3 ENST00000257789 ENSP00000257789 NA 599 A/T 6_88372821_A 1829 1795 Gcc/Acc COSM53412 0.01 0.983 NA 0.835 deleterious 23 7:38471790 A ENSG00000078053 AMPH amphiphysin ENST00000325590 ENSP00000317441 NA 386 T/M 7_38471790_A 1226 1157 aCg/aTg COSM53413 0.02 0.998 NA 0.857 deleterious 24 7:38471790 A ENSG00000078053 AMPH amphiphysin ENST00000441628 ENSP00000415085 NA 137 T/M 7_38471790_A 408 410 aCg/aTg COSM53413 0 0.983 NA 0.929 deleterious 3 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000223341 ENSP00000223341 NA 82 L/R 7_43918688_C 622 245 cTc/cGc COSM53414 0.05 0.995 NA 0.803 deleterious 2 9:32473058 A ENSG00000107201 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 ENST00000545044 ENSP00000443055 NA 440 L/F 9_32473058_A 1810 1320 ttA/ttT COSM53415 0 0.918 NA 0.869 deleterious 10 9:32473058 A ENSG00000107201 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 ENST00000379883 ENSP00000369213 DDX58_HUMAN 643 L/F 9_32473058_A 2087 1929 ttA/ttT COSM53415 0.01 0.96 3.78 0.808 deleterious 1 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000402306 ENSP00000384955 NA 116 L/R 7_43918688_C 387 347 cTc/cGc COSM53414 0.05 0.995 NA 0.803 deleterious 0 9:32473058 A ENSG00000107201 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 ENST00000542096 ENSP00000442160 NA 572 L/F 9_32473058_A 2292 1716 ttA/ttT COSM53415 0.01 0.96 NA 0.808 deleterious 7 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000453200 ENSP00000396918 URGCP_HUMAN 125 L/R 7_43918688_C 868 374 cTc/cGc COSM53414 0.05 0.995 2.545 0.803 deleterious 6 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000443736 ENSP00000392136 NA 82 L/R 7_43918688_C 420 245 cTc/cGc COSM53414 0.05 0.995 NA 0.803 deleterious 5 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000455877 ENSP00000392963 NA 82 L/R 7_43918688_C 469 245 cTc/cGc COSM53414 0 0.995 NA 0.958 deleterious 4 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000426198 ENSP00000389990 NA 82 L/R 7_43918688_C 640 245 cTc/cGc COSM53414 0.09 0.995 NA 0.467 neutral 9 9:32473058 A ENSG00000107201 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 ENST00000379868 ENSP00000369197 NA 440 L/F 9_32473058_A 1823 1320 ttA/ttT COSM53415 0.01 0.96 NA 0.808 deleterious 8 7:43918688 C ENSG00000106608 URGCP upregulator of cell proliferation ENST00000336086 ENSP00000336872 NA 82 L/R 7_43918688_C 2482 245 cTc/cGc COSM53414 0.05 0.995 NA 0.803 deleterious