annotate test-data/chr1.fa @ 11:d82af79d5f27 draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 3accce77966950e310dbfa7576d5b3c828b9c60c
author bgruening
date Thu, 23 Aug 2018 13:27:21 -0400
parents e1d38fef6dd5
children
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3
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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1 >TestChromosomeForGalaxy
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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2 CACTGAATTGACCCTTGGCAATGGTCTGTTCCCGCACCCAACACCTGGCTCCACTACGTT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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3 GAAACACACACACACACACACACACACACACACACACACACACACACACGTGATATTTGC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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4 TTTTAAGATCATAAAACACCAGGAAGGAGACAAAAGCTCTTATGCGTCATCTGAGATGAC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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5 ACATGTACTGTTAAAGCGTGCGTTTATTTCAAACATTAATGAAATTTGCAGAACCCAAAC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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6 TAAAGAGAGAGGATAGATAAGACATGCTGCAGTTCTTGCCCTAACTTTCAATCCCAACAA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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7 CTGAAATGTCTTCCAGAGAAGTAACTCCCCCCGGTAAGGATGTAGCGCGGTCCCTACGTG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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8 GGTCTAAGGGATCTGACCCACGACGCACTGCACTGGGTTCACGAAGCGCCTCCTCGCAGG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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9 CGGTTATCTCGGTATCTCTGAGAGCGGCGGGCTCTCGCTCCCGCTCCAGGGATTCGGGGC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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10 AGAAAGAGAACATCCCACAGTTGGCGGGAGTTACGCAAGACAGTCAGACCCGGACGTCAC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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11 TCGTGAGTGCCCCGACCCCCCTCCACCCCAGAGGCGGGGCCATCGCCTTCCTTCCGAACT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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12 CGGGATCGATCTGGAGCTCCGGGAATTTCCCTGGCCCGGGACTCCGGGCTTTCCAGCCCC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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13 AACCATGCATAAAAGGGGTTCGCCGTTCTCGGAGAGCCACAGAGCCCGGGCCACAGGCAG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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14 CTCCTTGCCAGCTCTCCTCCTCGCACAGCCGCTCGAACCGCCTGCTGAGCCCCATGGCCC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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15 GCGCCACGCTCTCCGCCGCCCCCAGCAATCCCCGGCTCCTGCGGGTGGCGCTGCTGCTCC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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16 TGCTCCTGGTGGCCGCCAGCCGGCGCGCAGCAGGTGGGTCCCGGCGCCCTGGGGTCCCCG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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17 GGCCGGACGCGGCTGGGGTGGGCGCCCCGCGCCGACAGCCCCGCTCAATCAGCGAGTCTC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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18 TTCTTCCCTAGGAGCGCCCCTGGCCACTGAACTGCGCTGCCAGTGCTTGCAGACCCTGCA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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19 GGGAATTCACCTCAAGAACATCCAAAGTGTGAAGGTGAAGTCCCCCGGACCCCACTGCGC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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20 CCAAACCGAAGTCATGTAAGTCTCGCCCATCGCTGCCGCTGCCACTGCTGGGGTCCCCGA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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21 CTCTCCCGCTGCCCCAAACCCTGTCCTCAGCCCGACCTCCTGTCTCACGAGATTCCCTTC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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22 TCTCTGCAGAGCCACACTCAAGAATGGGCAGAAAGCTTGTCTCAACCCCGCATCGCCCAT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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23 GGTTAAGAAAATCATCGAAAAGATGCTGAAAAAGTAAGTTATAATTTCCATGTACACAGG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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24 CGACTGGAGCTGTTGGTCAGAAATACTGGCGTCTGCCCCCTAAAAAGTAAATCAGGAAAA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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25 CCCAGGGTTAGCTGCAGGACTGAAAAAATTATTATTTTCACAAAGTTGCCATTAAGGTTA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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26 TTAATCTGTTCTGGTGCCAGAGGATATTCCCAGTGCCCAGGGTCACCACCCAGGTTCTTC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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27 CCTCCTGCCAGTGAATGTAGGTAAAACTGCTTTCATGTAAGGTCTCATTGGAGTTTGCCA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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28 GTTGTGCTGAAGTGTTTTCCACCTGTTAAAAAACACAAGCTTCATTTCCCCTAGTTCCTA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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29 CTGACTTTCAGACCTGAAAAGCAGACCCCCTGGTTTTTTGTAAAAGTTTAGGGTTGAAGT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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30 GCAGAGATTTCACAATAATATTGCACTGGGTATATAACTGGTTGCCACCACCTATTAGCC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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31 ATGTCACTCAGAGACAATATTATTTAGTTTATCTGAGACTCAGCAAAACAGGGAAAATAA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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32 TGGTAGCTACATCATGAGGTTGCTTTGAGGCTCAAGTGAGGCCCAGTATGACAAAGAGCA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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33 ATAGGCTCTGGCTGTTTTAGCCAGTAAAACAGTGTAGACTGCCACTCCTCCACCCCACGT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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34 CACCCCCATTCCTAAAAGAGCATCCCAAGCCTAGAGGTCCTTGCCACACAGCACAGCTGT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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35 CACAGGCAGTACCCACTTGGGTGCCAGGCTGGGGAAACTGCATTCAGAAAACTCTAGAGC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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36 CTGGGGAAACAGGACAGGAGAAGACTGTTGTGCAGTCAGCTTTCCTGAGCACCTACTCAG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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37 GGCACCCATTTTCTCATTACAGTGGCAAATCCAACTGACCAGAAGGAAGGAGGAAGCTTA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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38 TTGGTGGCTGTTCCTGAAGGAGGCCCTGCCCTTACAGGAACAGAAGAGGAAAGAGAGACA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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39 CAGCTGCAGAGGCCACCTGGATTGCGCCTAATGTGTTTGAGCATCACTTAGGAGAAGTCT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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40 TCTATTTATTTATTTATTTATTTATTTGTTTGTTTTAGAAGATTCTATGTTAATATTTTA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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41 TGTGTAAAATAAGGTTATGATTGAATCTACTTGCACACTCTCCCATTATATTTATTGTTT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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42 ATTTTAGGTCAAACCCAAGTTAGTTCAATCCTGATTCATATTTAATTTGAAGATAGAAGG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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43 TTTGCAGATATTCTCTAGTCATTTGTTAATATTTCTTCGTGATGACATATCACATGTCAG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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44 CCACTGTGATAGAGGCTGAGGAATCCAAGAAAATGGCCAGTGAGATCAATGTGACGGCAG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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45 GGAAATGTATGTGTGTCTATTTTGTAACTGTAAAGATGAATGTCAGTTGTTATTTATTGA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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46 AATGATTTCACAGTGTGTGGTCAACATTTCTCATGTTGAAGCTTTAAGAACTAAAATGTT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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47 CTAAATATCCCTTGGACATTTTATGTCTTTCTTGTAAGGCATACTGCCTTGTTTAATGTT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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48 AATTATGCAGTGTTTCCCTCTGTGTTAGAGCAGAGAGGTTTCGATATTTATTGATGTTTT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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49 CACAAAGAACAGGAAAATAAAATATTTAAAAATATAAAATGTTTGTTTTATTTTGGGGGA
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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50 AACAAGGACTATATTTGCTGAAAAATCTGATGATTTACATCAATATTTATTTCTCAATTT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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51 TTTTCTGGGTTTTCAATCTGCTATACAGATAAACTATGAATTATGCCTAATTTCATGTGG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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52 TGATTGCTGTCACTCCCCTTGGCTCTCACCTAGTAAAGAATGTGCCTTACCAAACTATGG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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53 TCTTGCCCCTGATGGGAGAATCACTGATACATATTGCCATTTTTACAAGAAGTTCCTTAC
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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54 TACCTTGCTACTCAAATTTACCTCCTTAAAAATATGGAGGGGGGAAATATGGCAGAGACG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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55 TTTTAACCAGAGCAACTCCATCTTGAATAGGGGCTAGGCAAAATGGGGCTGAGGTTTACT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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56 GGGCTGGGCTGCATTCCCAGTAGGTTAGGCATTCGAAGTCACAGGATGAGATAGGAGATT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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57 GGCACAAGATACAGGTCATAAAGACCTTGCTGATAAAACAGGTTACAGTAAAGAAGCCAG
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
bgruening
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58 CTAAAACCCACCAAAGCCAAGATGGAGACGAGAGTGACCTCTGTCGTTCTCACTCGTCAT
e1d38fef6dd5 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
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59 TATACACTAATTATAATATATTAGCATGCTAAAAGACAC