diff test-data/seq2.txt @ 0:688380ac4689 draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rnasnp commit 6e51a331dbeab2786d8df5fd379ae3a63eb61d83

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/seq2.txt	Tue Dec 13 11:47:46 2016 -0500
@@ -0,0 +1,139 @@
+>gi|5420376|emb|AJ238799.1| Hepatitis C virus type 1b complete genome, isolate Con1
+GCCAGCCCCCGATTGGGGGCGACACTCCACCATAGATCACTCCCCTGTGAGGAACTACTGTCTTCACGCA
+GAAAGCGTCTAGCCATGGCGTTAGTATGAGTGTCGTGCAGCCTCCAGGACCCCCCCTCCCGGGAGAGCCA
+TAGTGGTCTGCGGAACCGGTGAGTACACCGGAATTGCCAGGACGACCGGGTCCTTTCTTGGATCAACCCG
+CTCAATGCCTGGAGATTTGGGCGTGCCCCCGCGAGACTGCTAGCCGAGTAGTGTTGGGTCGCGAAAGGCC
+TTGTGGTACTGCCTGATAGGGTGCTTGCGAGTGCCCCGGGAGGTCTCGTAGACCGTGCACCATGAGCACG
+AATCCTAAACCTCAAAGAAAAACCAAACGTAACACCAACCGCCGCCCACAGGACGTCAAGTTCCCGGGCG
+GTGGTCAGATCGTCGGTGGAGTTTACCTGTTGCCGCGCAGGGGCCCCAGGTTGGGTGTGCGCGCGACTAG
+GAAGACTTCCGAGCGGTCGCAACCTCGTGGAAGGCGACAACCTATCCCCAAGGCTCGCCAGCCCGAGGGT
+AGGGCCTGGGCTCAGCCCGGGTACCCCTGGCCCCTCTATGGCAATGAGGGCTTGGGGTGGGCAGGATGGC
+TCCTGTCACCCCGTGGCTCTCGGCCTAGTTGGGGCCCCACGGACCCCCGGCGTAGGTCGCGCAATTTGGG
+TAAGGTCATCGATACCCTCACGTGCGGCTTCGCCGATCTCATGGGGTACATTCCGCTCGTCGGCGCCCCC
+CTAGGGGGCGCTGCCAGGGCCCTGGCGCATGGCGTCCGGGTTCTGGAGGACGGCGTGAACTATGCAACAG
+GGAATCTGCCCGGTTGCTCCTTTTCTATCTTCCTTTTGGCTTTGCTGTCCTGTTTGACCATCCCAGCTTC
+CGCTTATGAAGTGCGCAACGTATCCGGAGTGTACCATGTCACGAACGACTGCTCCAACGCAAGCATTGTG
+TATGAGGCAGCGGACATGATCATGCATACCCCCGGGTGCGTGCCCTGCGTTCGGGAGAACAACTCCTCCC
+GCTGCTGGGTAGCGCTCACTCCCACGCTCGCGGCCAGGAACGCTAGCGTCCCCACTACGACGATACGACG
+CCATGTCGATTTGCTCGTTGGGGCGGCTGCTCTCTGCTCCGCTATGTACGTGGGAGATCTCTGCGGATCT
+GTTTTCCTCGTCGCCCAGCTGTTCACCTTCTCGCCTCGCCGGCACGAGACAGTACAGGACTGCAATTGCT
+CAATATATCCCGGCCACGTGACAGGTCACCGTATGGCTTGGGATATGATGATGAACTGGTCACCTACAGC
+AGCCCTAGTGGTATCGCAGTTACTCCGGATCCCACAAGCTGTCGTGGATATGGTGGCGGGGGCCCATTGG
+GGAGTCCTAGCGGGCCTTGCCTACTATTCCATGGTGGGGAACTGGGCTAAGGTTCTGATTGTGATGCTAC
+TCTTTGCCGGCGTTGACGGGGGAACCTATGTGACAGGGGGGACGATGGCCAAAAACACCCTCGGGATTAC
+GTCCCTCTTTTCACCCGGGTCATCCCAGAAAATCCAGCTTGTAAACACCAACGGCAGCTGGCACATCAAC
+AGGACTGCCCTGAACTGCAATGACTCCCTCAACACTGGGTTCCTTGCTGCGCTGTTCTACGTGCACAAGT
+TCAACTCATCTGGATGCCCAGAGCGCATGGCCAGCTGCAGCCCCATCGACGCGTTCGCTCAGGGGTGGGG
+GCCCATCACTTACAATGAGTCACACAGCTCGGACCAGAGGCCTTATTGTTGGCACTACGCACCCCGGCCG
+TGCGGTATCGTACCCGCGGCGCAGGTGTGTGGTCCAGTGTACTGCTTCACCCCAAGCCCTGTCGTGGTGG
+GGACGACCGACCGGTTCGGCGTCCCTACGTACAGTTGGGGGGAGAATGAGACGGACGTGCTGCTTCTTAA
+CAACACGCGGCCGCCGCAAGGCAACTGGTTTGGCTGTACATGGATGAATAGCACTGGGTTCACCAAGACG
+TGCGGGGGCCCCCCGTGTAACATCGGGGGGATCGGCAATAAAACCTTGACCTGCCCCACGGACTGCTTCC
+GGAAGCACCCCGAGGCCACTTACACCAAGTGTGGTTCGGGGCCTTGGTTGACACCCAGATGCTTGGTCCA
+CTACCCATACAGGCTTTGGCACTACCCCTGCACTGTCAACTTTACCATCTTCAAGGTTAGGATGTACGTG
+GGGGGAGTGGAGCACAGGCTCGAAGCCGCATGCAATTGGACTCGAGGAGAGCGTTGTAACCTGGAGGACA
+GGGACAGATCAGAGCTTAGCCCGCTGCTGCTGTCTACAACGGAGTGGCAGGTATTGCCCTGTTCCTTCAC
+CACCCTACCGGCTCTGTCCACTGGTTTGATCCATCTCCATCAGAACGTCGTGGACGTACAATACCTGTAC
+GGTATAGGGTCGGCGGTTGTCTCCTTTGCAATCAAATGGGAGTATGTCCTGTTGCTCTTCCTTCTTCTGG
+CGGACGCGCGCGTCTGTGCCTGCTTGTGGATGATGCTGCTGATAGCTCAAGCTGAGGCCGCCCTAGAGAA
+CCTGGTGGTCCTCAACGCGGCATCCGTGGCCGGGGCGCATGGCATTCTCTCCTTCCTCGTGTTCTTCTGT
+GCTGCCTGGTACATCAAGGGCAGGCTGGTCCCTGGGGCGGCATATGCCCTCTACGGCGTATGGCCGCTAC
+TCCTGCTCCTGCTGGCGTTACCACCACGAGCATACGCCATGGACCGGGAGATGGCAGCATCGTGCGGAGG
+CGCGGTTTTCGTAGGTCTGATACTCTTGACCTTGTCACCGCACTATAAGCTGTTCCTCGCTAGGCTCATA
+TGGTGGTTACAATATTTTATCACCAGGGCCGAGGCACACTTGCAAGTGTGGATCCCCCCCCTCAACGTTC
+GGGGGGGCCGCGATGCCGTCATCCTCCTCACGTGCGCGATCCACCCAGAGCTAATCTTTACCATCACCAA
+AATCTTGCTCGCCATACTCGGTCCACTCATGGTGCTCCAGGCTGGTATAACCAAAGTGCCGTACTTCGTG
+CGCGCACACGGGCTCATTCGTGCATGCATGCTGGTGCGGAAGGTTGCTGGGGGTCATTATGTCCAAATGG
+CTCTCATGAAGTTGGCCGCACTGACAGGTACGTACGTTTATGACCATCTCACCCCACTGCGGGACTGGGC
+CCACGCGGGCCTACGAGACCTTGCGGTGGCAGTTGAGCCCGTCGTCTTCTCTGATATGGAGACCAAGGTT
+ATCACCTGGGGGGCAGACACCGCGGCGTGTGGGGACATCATCTTGGGCCTGCCCGTCTCCGCCCGCAGGG
+GGAGGGAGATACATCTGGGACCGGCAGACAGCCTTGAAGGGCAGGGGTGGCGACTCCTCGCGCCTATTAC
+GGCCTACTCCCAACAGACGCGAGGCCTACTTGGCTGCATCATCACTAGCCTCACAGGCCGGGACAGGAAC
+CAGGTCGAGGGGGAGGTCCAAGTGGTCTCCACCGCAACACAATCTTTCCTGGCGACCTGCGTCAATGGCG
+TGTGTTGGACTGTCTATCATGGTGCCGGCTCAAAGACCCTTGCCGGCCCAAAGGGCCCAATCACCCAAAT
+GTACACCAATGTGGACCAGGACCTCGTCGGCTGGCAAGCGCCCCCCGGGGCGCGTTCCTTGACACCATGC
+ACCTGCGGCAGCTCGGACCTTTACTTGGTCACGAGGCATGCCGATGTCATTCCGGTGCGCCGGCGGGGCG
+ACAGCAGGGGGAGCCTACTCTCCCCCAGGCCCGTCTCCTACTTGAAGGGCTCTTCGGGCGGTCCACTGCT
+CTGCCCCTCGGGGCACGCTGTGGGCATCTTTCGGGCTGCCGTGTGCACCCGAGGGGTTGCGAAGGCGGTG
+GACTTTGTACCCGTCGAGTCTATGGAAACCACTATGCGGTCCCCGGTCTTCACGGACAACTCGTCCCCTC
+CGGCCGTACCGCAGACATTCCAGGTGGCCCATCTACACGCCCCTACTGGTAGCGGCAAGAGCACTAAGGT
+GCCGGCTGCGTATGCAGCCCAAGGGTATAAGGTGCTTGTCCTGAACCCGTCCGTCGCCGCCACCCTAGGT
+TTCGGGGCGTATATGTCTAAGGCACATGGTATCGACCCTAACATCAGAACCGGGGTAAGGACCATCACCA
+CGGGTGCCCCCATCACGTACTCCACCTATGGCAAGTTTCTTGCCGACGGTGGTTGCTCTGGGGGCGCCTA
+TGACATCATAATATGTGATGAGTGCCACTCAACTGACTCGACCACTATCCTGGGCATCGGCACAGTCCTG
+GACCAAGCGGAGACGGCTGGAGCGCGACTCGTCGTGCTCGCCACCGCTACGCCTCCGGGATCGGTCACCG
+TGCCACATCCAAACATCGAGGAGGTGGCTCTGTCCAGCACTGGAGAAATCCCCTTTTATGGCAAAGCCAT
+CCCCATCGAGACCATCAAGGGGGGGAGGCACCTCATTTTCTGCCATTCCAAGAAGAAATGTGATGAGCTC
+GCCGCGAAGCTGTCCGGCCTCGGACTCAATGCTGTAGCATATTACCGGGGCCTTGATGTATCCGTCATAC
+CAACTAGCGGAGACGTCATTGTCGTAGCAACGGACGCTCTAATGACGGGCTTTACCGGCGATTTCGACTC
+AGTGATCGACTGCAATACATGTGTCACCCAGACAGTCGACTTCAGCCTGGACCCGACCTTCACCATTGAG
+ACGACGACCGTGCCACAAGACGCGGTGTCACGCTCGCAGCGGCGAGGCAGGACTGGTAGGGGCAGGATGG
+GCATTTACAGGTTTGTGACTCCAGGAGAACGGCCCTCGGGCATGTTCGATTCCTCGGTTCTGTGCGAGTG
+CTATGACGCGGGCTGTGCTTGGTACGAGCTCACGCCCGCCGAGACCTCAGTTAGGTTGCGGGCTTACCTA
+AACACACCAGGGTTGCCCGTCTGCCAGGACCATCTGGAGTTCTGGGAGAGCGTCTTTACAGGCCTCACCC
+ACATAGACGCCCATTTCTTGTCCCAGACTAAGCAGGCAGGAGACAACTTCCCCTACCTGGTAGCATACCA
+GGCTACGGTGTGCGCCAGGGCTCAGGCTCCACCTCCATCGTGGGACCAAATGTGGAAGTGTCTCATACGG
+CTAAAGCCTACGCTGCACGGGCCAACGCCCCTGCTGTATAGGCTGGGAGCCGTTCAAAACGAGGTTACTA
+CCACACACCCCATAACCAAATACATCATGGCATGCATGTCGGCTGACCTGGAGGTCGTCACGAGCACCTG
+GGTGCTGGTAGGCGGAGTCCTAGCAGCTCTGGCCGCGTATTGCCTGACAACAGGCAGCGTGGTCATTGTG
+GGCAGGATCATCTTGTCCGGAAAGCCGGCCATCATTCCCGACAGGGAAGTCCTTTACCGGGAGTTCGATG
+AGATGGAAGAGTGCGCCTCACACCTCCCTTACATCGAACAGGGAATGCAGCTCGCCGAACAATTCAAACA
+GAAGGCAATCGGGTTGCTGCAAACAGCCACCAAGCAAGCGGAGGCTGCTGCTCCCGTGGTGGAATCCAAG
+TGGCGGACCCTCGAAGCCTTCTGGGCGAAGCATATGTGGAATTTCATCAGCGGGATACAATATTTAGCAG
+GCTTGTCCACTCTGCCTGGCAACCCCGCGATAGCATCACTGATGGCATTCACAGCCTCTATCACCAGCCC
+GCTCACCACCCAACATACCCTCCTGTTTAACATCCTGGGGGGATGGGTGGCCGCCCAACTTGCTCCTCCC
+AGCGCTGCTTCTGCTTTCGTAGGCGCCGGCATCGCTGGAGCGGCTGTTGGCAGCATAGGCCTTGGGAAGG
+TGCTTGTGGATATTTTGGCAGGTTATGGAGCAGGGGTGGCAGGCGCGCTCGTGGCCTTTAAGGTCATGAG
+CGGCGAGATGCCCTCCACCGAGGACCTGGTTAACCTACTCCCTGCTATCCTCTCCCCTGGCGCCCTAGTC
+GTCGGGGTCGTGTGCGCAGCGATACTGCGTCGGCACGTGGGCCCAGGGGAGGGGGCTGTGCAGTGGATGA
+ACCGGCTGATAGCGTTCGCTTCGCGGGGTAACCACGTCTCCCCCACGCACTATGTGCCTGAGAGCGACGC
+TGCAGCACGTGTCACTCAGATCCTCTCTAGTCTTACCATCACTCAGCTGCTGAAGAGGCTTCACCAGTGG
+ATCAACGAGGACTGCTCCACGCCATGCTCCGGCTCGTGGCTAAGAGATGTTTGGGATTGGATATGCACGG
+TGTTGACTGATTTCAAGACCTGGCTCCAGTCCAAGCTCCTGCCGCGATTGCCGGGAGTCCCCTTCTTCTC
+ATGTCAACGTGGGTACAAGGGAGTCTGGCGGGGCGACGGCATCATGCAAACCACCTGCCCATGTGGAGCA
+CAGATCACCGGACATGTGAAAAACGGTTCCATGAGGATCGTGGGGCCTAGGACCTGTAGTAACACGTGGC
+ATGGAACATTCCCCATTAACGCGTACACCACGGGCCCCTGCACGCCCTCCCCGGCGCCAAATTATTCTAG
+GGCGCTGTGGCGGGTGGCTGCTGAGGAGTACGTGGAGGTTACGCGGGTGGGGGATTTCCACTACGTGACG
+GGCATGACCACTGACAACGTAAAGTGCCCGTGTCAGGTTCCGGCCCCCGAATTCTTCACAGAAGTGGATG
+GGGTGCGGTTGCACAGGTACGCTCCAGCGTGCAAACCCCTCCTACGGGAGGAGGTCACATTCCTGGTCGG
+GCTCAATCAATACCTGGTTGGGTCACAGCTCCCATGCGAGCCCGAACCGGACGTAGCAGTGCTCACTTCC
+ATGCTCACCGACCCCTCCCACATTACGGCGGAGACGGCTAAGCGTAGGCTGGCCAGGGGATCTCCCCCCT
+CCTTGGCCAGCTCATCAGCTAGCCAGCTGTCTGCGCCTTCCTTGAAGGCAACATGCACTACCCGTCATGA
+CTCCCCGGACGCTGACCTCATCGAGGCCAACCTCCTGTGGCGGCAGGAGATGGGCGGGAACATCACCCGC
+GTGGAGTCAGAAAATAAGGTAGTAATTTTGGACTCTTTCGAGCCGCTCCAAGCGGAGGAGGATGAGAGGG
+AAGTATCCGTTCCGGCGGAGATCCTGCGGAGGTCCAGGAAATTCCCTCGAGCGATGCCCATATGGGCACG
+CCCGGATTACAACCCTCCACTGTTAGAGTCCTGGAAGGACCCGGACTACGTCCCTCCAGTGGTACACGGG
+TGTCCATTGCCGCCTGCCAAGGCCCCTCCGATACCACCTCCACGGAGGAAGAGGACGGTTGTCCTGTCAG
+AATCTACCGTGTCTTCTGCCTTGGCGGAGCTCGCCACAAAGACCTTCGGCAGCTCCGAATCGTCGGCCGT
+CGACAGCGGCACGGCAACGGCCTCTCCTGACCAGCCCTCCGACGACGGCGACGCGGGATCCGACGTTGAG
+TCGTACTCCTCCATGCCCCCCCTTGAGGGGGAGCCGGGGGATCCCGATCTCAGCGACGGGTCTTGGTCTA
+CCGTAAGCGAGGAGGCTAGTGAGGACGTCGTCTGCTGCTCGATGTCCTACACATGGACAGGCGCCCTGAT
+CACGCCATGCGCTGCGGAGGAAACCAAGCTGCCCATCAATGCACTGAGCAACTCTTTGCTCCGTCACCAC
+AACTTGGTCTATGCTACAACATCTCGCAGCGCAAGCCTGCGGCAGAAGAAGGTCACCTTTGACAGACTGC
+AGGTCCTGGACGACCACTACCGGGACGTGCTCAAGGAGATGAAGGCGAAGGCGTCCACAGTTAAGGCTAA
+ACTTCTATCCGTGGAGGAAGCCTGTAAGCTGACGCCCCCACATTCGGCCAGATCTAAATTTGGCTATGGG
+GCAAAGGACGTCCGGAACCTATCCAGCAAGGCCGTTAACCACATCCGCTCCGTGTGGAAGGACTTGCTGG
+AAGACACTGAGACACCAATTGACACCACCATCATGGCAAAAAATGAGGTTTTCTGCGTCCAACCAGAGAA
+GGGGGGCCGCAAGCCAGCTCGCCTTATCGTATTCCCAGATTTGGGGGTTCGTGTGTGCGAGAAAATGGCC
+CTTTACGATGTGGTCTCCACCCTCCCTCAGGCCGTGATGGGCTCTTCATACGGATTCCAATACTCTCCTG
+GACAGCGGGTCGAGTTCCTGGTGAATGCCTGGAAAGCGAAGAAATGCCCTATGGGCTTCGCATATGACAC
+CCGCTGTTTTGACTCAACGGTCACTGAGAATGACATCCGTGTTGAGGAGTCAATCTACCAATGTTGTGAC
+TTGGCCCCCGAAGCCAGACAGGCCATAAGGTCGCTCACAGAGCGGCTTTACATCGGGGGCCCCCTGACTA
+ATTCTAAAGGGCAGAACTGCGGCTATCGCCGGTGCCGCGCGAGCGGTGTACTGACGACCAGCTGCGGTAA
+TACCCTCACATGTTACTTGAAGGCCGCTGCGGCCTGTCGAGCTGCGAAGCTCCAGGACTGCACGATGCTC
+GTATGCGGAGACGACCTTGTCGTTATCTGTGAAAGCGCGGGGACCCAAGAGGACGAGGCGAGCCTACGGG
+CCTTCACGGAGGCTATGACTAGATACTCTGCCCCCCCTGGGGACCCGCCCAAACCAGAATACGACTTGGA
+GTTGATAACATCATGCTCCTCCAATGTGTCAGTCGCGCACGATGCATCTGGCAAAAGGGTGTACTATCTC
+ACCCGTGACCCCACCACCCCCCTTGCGCGGGCTGCGTGGGAGACAGCTAGACACACTCCAGTCAATTCCT
+GGCTAGGCAACATCATCATGTATGCGCCCACCTTGTGGGCAAGGATGATCCTGATGACTCATTTCTTCTC
+CATCCTTCTAGCTCAGGAACAACTTGAAAAAGCCCTAGATTGTCAGATCTACGGGGCCTGTTACTCCATT
+GAGCCACTTGACCTACCTCAGATCATTCAACGACTCCATGGCCTTAGCGCATTTTCACTCCATAGTTACT
+CTCCAGGTGAGATCAATAGGGTGGCTTCATGCCTCAGGAAACTTGGGGTACCGCCCTTGCGAGTCTGGAG
+ACATCGGGCCAGAAGTGTCCGCGCTAGGCTACTGTCCCAGGGGGGGAGGGCTGCCACTTGTGGCAAGTAC
+CTCTTCAACTGGGCAGTAAGGACCAAGCTCAAACTCACTCCAATCCCGGCTGCGTCCCAGTTGGATTTAT
+CCAGCTGGTTCGTTGCTGGTTACAGCGGGGGAGACATATATCACAGCCTGTCTCGTGCCCGACCCCGCTG
+GTTCATGTGGTGCCTACTCCTACTTTCTGTAGGGGTAGGCATCTATCTACTCCCCAACCGATGAACGGGG
+AGCTAAACACTCCAGGCCAATAGGCCATCCTGTTTTTTTCCCTTTTTTTTTTTCTTTTTTTTTTTTTTTT
+TTTTTTTTTTTTTTTTTTCTCCTTTTTTTTTCCTCTTTTTTTCCTTTTCTTTCCTTTGGTGGCTCCATCT
+TAGCCCTAGTCACGGCTAGCTGTGAAAGGTCCGTGAGCCGCTTGACTGCAGAGAGTGCTGATACTGGCCT
+CTCTGCAGATCAAGT