Mercurial > repos > rnateam > rnacommender

diff rnacommender.xml @ 1:79c9b4b34b63 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/rna_commander/tools/rna_tools/rna_commender commit 7ef62aa3d86abd4b911e35447646712a4628e7fe
author rnateam
date Fri, 29 Jul 2016 03:27:44 -0400
parents d04fa5201f51
children
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line diff
--- a/rnacommender.xml	Thu Jul 28 05:56:54 2016 -0400
+++ b/rnacommender.xml	Fri Jul 29 03:27:44 2016 -0400
@@ -9,7 +9,13 @@
         <requirement type="package" version="0.8.2">theano</requirement>
         <requirement type="package" version="2.10.0">requests</requirement>
     </requirements>
-    <command detect_errors="aggressive">
+    <stdio>
+        <exit_code range="1:" />
+        <exit_code range=":-1" />
+        <regex match="Error:" />
+        <regex match="Exception:" />
+    </stdio>
+    <command>
     <![CDATA[
         sh $__tool_directory__/init.sh 2> hide.txt &&
         THEANO_FLAGS=base_compiledir=./tmp python $__tool_directory__/main.py "$infile"