Mercurial > repos > rnateam > graphprot_predict_profile
comparison test-data/test.params @ 1:adcc4c457c3c draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/graphprot commit f3fb925b83a4982e0cf9a0c11ff93ecbb8e4e6d5"
| author | bgruening |
|---|---|
| date | Wed, 22 Jan 2020 15:14:12 +0000 |
| parents | 574b10dd07ef |
| children |
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| 0:574b10dd07ef | 1:adcc4c457c3c |
|---|---|
| 1 epochs: 20 | 1 epochs: 20 |
| 2 lambda: 0.001 | 2 lambda: 0.01 |
| 3 R: 1 | 3 R: 1 |
| 4 D: 4 | 4 D: 3 |
| 5 bitsize: 14 | 5 bitsize: 14 |
| 6 model_type: sequence | 6 model_type: sequence |
| 7 #ADDITIONAL MODEL PARAMETERS | 7 pos_train_ws_pred_median: 0.760321 |
| 8 ap_extlr: 5 | 8 pos_train_profile_median: 5.039610 |
| 9 gev_my: -2.5408 | 9 pos_train_avg_profile_median_1: 4.236340 |
| 10 gev_sigma: 1.6444 | 10 pos_train_avg_profile_median_2: 3.868431 |
| 11 gev_xi: -0.1383 | 11 pos_train_avg_profile_median_3: 3.331277 |
| 12 p50_score: 6.51534 | 12 pos_train_avg_profile_median_4: 2.998667 |
| 13 p50_p_val: 0.0009059744 | 13 pos_train_avg_profile_median_5: 2.829782 |
| 14 # ADDITIONAL MODEL INFO | 14 pos_train_avg_profile_median_6: 2.626623 |
| 15 organism: hsa | 15 pos_train_avg_profile_median_7: 2.447083 |
| 16 rbp_ens_gene_id: ENSG00000011304 | 16 pos_train_avg_profile_median_8: 2.349919 |
| 17 rbp_gene_name: PTBP1 | 17 pos_train_avg_profile_median_9: 2.239829 |
| 18 clip_method: eCLIP | 18 pos_train_avg_profile_median_10: 2.161676 |
| 19 pubmed_id: 27018577 |