# HG changeset patch
# User rnateam
# Date 1454338898 18000
# Node ID c112f77f0466f58db52dba44c627ebebb0bb55a4
# Parent  5fa4568fc6b2fbe206d0e6e6a5a517b4230db91b
fix dependencies

diff -r 5fa4568fc6b2 -r c112f77f0466 flexbar.pl
Binary file flexbar.pl has changed
diff -r 5fa4568fc6b2 -r c112f77f0466 macros.xml
--- a/macros.xml	Tue Jan 26 04:46:37 2016 -0500
+++ b/macros.xml	Mon Feb 01 10:01:38 2016 -0500
@@ -8,6 +8,8 @@
             <requirement type="package" version="0.6.9">pybedtools</requirement>
             <!-- <requirement type="package" version="2.24">bedtools</requirement> -->
             <requirement type="package" version="0.8.3">pysam</requirement>
+            <requirement type="package" version="4.1.0">gnu_awk</requirement>
+            <requirement type="package" version="8.22">gnu_coreutils</requirement>
         </requirements>
     </xml>
     <xml name="stdio">
diff -r 5fa4568fc6b2 -r c112f77f0466 merge_pcr_duplicates.xml
--- a/merge_pcr_duplicates.xml	Tue Jan 26 04:46:37 2016 -0500
+++ b/merge_pcr_duplicates.xml	Mon Feb 01 10:01:38 2016 -0500
@@ -1,9 +1,5 @@
 <tool id="merge_pcr_duplicates.py" name="Merge PCR duplicates" version="0.2.0">
   <description>according to random barcode library.</description>
-  <requirements>
-      <requirement type="package" version="4.1.0">gnu_awk</requirement>
-      <requirement type="package" version="8.22">gnu_coreutils</requirement>
-  </requirements>
   <macros>
     <import>macros.xml</import>
   </macros>
diff -r 5fa4568fc6b2 -r c112f77f0466 rm_spurious_events.xml
--- a/rm_spurious_events.xml	Tue Jan 26 04:46:37 2016 -0500
+++ b/rm_spurious_events.xml	Mon Feb 01 10:01:38 2016 -0500
@@ -1,9 +1,5 @@
 <tool id="rm_spurious_events.py" name="Remove spurious" version="0.1.0">
   <description>crosslinking events</description>
-  <requirements>
-      <requirement type="package" version="5.18.1">perl</requirement>
-      <requirement type="package" version="8.22">gnu_coreutils</requirement>
-  </requirements>
   <macros>
     <import>macros.xml</import>
   </macros>