diff convert_bc_to_binary_RY.py @ 50:0b9aab6aaebf draft

Uploaded 16cfcafe8b42055c5dd64e62c42b82b455027a40

--- a/convert_bc_to_binary_RY.py	Sat Dec 19 06:16:22 2015 -0500
+++ b/convert_bc_to_binary_RY.py	Tue Jan 26 04:38:27 2016 -0500
@@ -1,5 +1,13 @@
 #!/usr/bin/env python
 
+import argparse
+import logging
+from string import maketrans
+from sys import stdout
+from Bio import SeqIO
+from Bio.Seq import Seq
+from Bio.Alphabet import IUPAC
+
 tool_description = """
 Convert standard nucleotides to IUPAC nucleotide codes used for binary barcodes.
 
@@ -19,19 +27,6 @@
 Status: Testing
 """
 
-import argparse
-import logging
-from string import maketrans
-from sys import stdout
-from Bio import SeqIO
-from Bio.Seq import Seq
-from Bio.Alphabet import IUPAC
-
-# # avoid ugly python IOError when stdout output is piped into another program
-# # and then truncated (such as piping to head)
-# from signal import signal, SIGPIPE, SIG_DFL
-# signal(SIGPIPE, SIG_DFL)
-
 # parse command line arguments
 parser = argparse.ArgumentParser(description=tool_description,
                                  epilog=epilog,