Mercurial > repos > rnateam > aresite2

comparison aresite2.py @ 1:ed3a79e21230 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/aresite2 commit 4897e30d01fe0ef4742bd58636269fdba5c09603
author rnateam
date Sat, 04 Mar 2017 14:42:30 -0500
parents a203c4ed9166
children
comparison
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0:a203c4ed9166 1:ed3a79e21230
95 genes = aresite["genes"] 95 genes = aresite["genes"]
96 evh = aresite["hur_evidence"] 96 evh = aresite["hur_evidence"]
97 evt = aresite["ttp_evidence"] 97 evt = aresite["ttp_evidence"]
98 eva = aresite["auf_evidence"] 98 eva = aresite["auf_evidence"]
99 anno = aresite["annotation"] 99 anno = aresite["annotation"]
100 meanaccs = ['{:.4e}'.format(x) for x in aresite["meanacshort"]]
101 meanaccl = ['{:.4e}'.format(x) for x in aresite["meanaclong"]]
100 102
101 aresite = zip(chrs,starts,ends,mots,anno,strands,genes,transcripts,evh,evt,eva) 103 aresite = zip(chrs,starts,ends,mots,anno,strands,genes,transcripts,meanaccs,meanaccl,evh,evt,eva)
102 104
103 def getKey(item): 105 def getKey(item):
104 return item[1] 106 return item[1]
105 107
106 aresite = sorted(aresite, key=getKey) 108 aresite = sorted(aresite, key=getKey)