Mercurial > repos > rjmw > dimspy_process_scans
comparison macros.xml @ 1:769165c75514 draft default tip
planemo upload for repository https://github.com/computational-metabolomics/dimspy-galaxy commit 42331bc61ea07d75f88007e5a2c65eaf9e811f06
author | rjmw |
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date | Wed, 30 May 2018 09:20:20 -0400 |
parents | d129e75a31d9 |
children |
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0:d129e75a31d9 | 1:769165c75514 |
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1 <macros> | 1 <macros> |
2 <xml name="requirements"> | 2 <xml name="requirements"> |
3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="1.1.0">dimspy</requirement> | 4 <requirement type="package" version="1.2.0">dimspy</requirement> |
5 </requirements> | 5 </requirements> |
6 </xml> | |
7 <xml name="stdio"> | |
8 <stdio> | |
9 <exit_code range="1:" /> | |
10 </stdio> | |
11 </xml> | 6 </xml> |
12 | 7 |
13 <token name="@HDF5_PM_TO_TXT@"> | 8 <token name="@HDF5_PM_TO_TXT@"> |
14 dimspy hdf5-pm-to-txt | 9 dimspy hdf5-pm-to-txt |
15 --input "$hdf5_file_out" | 10 --input '$hdf5_file_out' |
16 --output "$matrix_file_out" | 11 --output '$matrix_file_out' |
17 --delimiter $delimiter | 12 --delimiter $delimiter |
18 --attribute_name $hdf5_to_txt.matrix_attr | 13 --attribute_name $hdf5_to_txt.matrix_attr |
19 --representation-samples $hdf5_to_txt.representation_samples | 14 --representation-samples $hdf5_to_txt.representation_samples |
20 </token> | 15 </token> |
21 | 16 |
22 <token name="@HDF5_PM_TO_TXT_COMPREHENSIVE@"> | 17 <token name="@HDF5_PM_TO_TXT_COMPREHENSIVE@"> |
23 dimspy hdf5-pm-to-txt | 18 dimspy hdf5-pm-to-txt |
24 --input "$hdf5_file_out" | 19 --input '$hdf5_file_out' |
25 --output "$matrix_comprehensive_file_out" | 20 --output '$matrix_comprehensive_file_out' |
26 --delimiter $delimiter | 21 --delimiter $delimiter |
27 --comprehensive | 22 --comprehensive |
28 --attribute_name $hdf5_to_txt.matrix_attr | 23 --attribute_name $hdf5_to_txt.matrix_attr |
29 --representation-samples $hdf5_to_txt.representation_samples | 24 --representation-samples $hdf5_to_txt.representation_samples |
30 </token> | 25 </token> |