Mercurial > repos > rijst > snptools

diff gbk_to_fasta.xml @ 0:cc961e057668 draft

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author rijst
date Wed, 12 Dec 2012 06:26:26 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/gbk_to_fasta.xml	Wed Dec 12 06:26:26 2012 -0500
@@ -0,0 +1,13 @@
+<tool id="gbk2fasta" name="Genbank-to-Fasta">
+  <description>produces a Fasta file from a genbank file</description>
+  <command interpreter="python">gbk_to_fasta.py $input $output</command>
+  <inputs>
+    <param name="input" type="data" format="text" label="Genbank file" />
+  </inputs>
+  <outputs>
+    <data name="output" format="fasta" label="${tool.name} on ${on_string}: converted Genbank file" />
+  </outputs>
+  <help>
+  This tool produces a fasta file from a genbank file containing a sequence.
+  </help>
+</tool>