# HG changeset patch # User rico # Date 1333653421 14400 # Node ID 8b03fc55e61a0ef1abec499b3e4489a975a266fc # Parent d82a83653e1468c58534784cf57fe8fd5dad566f Uploaded diff -r d82a83653e14 -r 8b03fc55e61a pathway_image.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/pathway_image.xml Thu Apr 05 15:17:01 2012 -0400 @@ -0,0 +1,46 @@ + + KEGG pathway images + + + mkpthwpng.py + "--input=${input}" + "--output=${output}" + "--KEGGpath=${pathway}" + "--posKEGGclmn=${input.metadata.kegg_path}" + "--KEGGgeneposcolmn=${input.metadata.kegg_gene}" + + + + + + + + + + + + + + + + + + + + + + + + + + + + +**What it does** + +This tool produces an image of an input KEGG pathway, highlighting the +modules representing genes in an input list. NOTE: a given gene can +be assigned to multiple modules, and different genes can be assigned to +the same module. + +