# HG changeset patch # User rico # Date 1333735909 14400 # Node ID 416a79f7cf6b0a8cfb625530ae03e4e4af3cf19b Uploaded diff -r 000000000000 -r 416a79f7cf6b pathway_image.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/pathway_image.xml Fri Apr 06 14:11:49 2012 -0400 @@ -0,0 +1,48 @@ + + KEGG pathway images + + + mkpthwpng.py + "--input=${input}" + "--output=${output}" + "--KEGGpath=${pathway}" + "--posKEGGclmn=${input.metadata.kegg_path}" + "--KEGGgeneposcolmn=${input.metadata.kegg_gene}" + + + + + + + + + + + + + + + + + + + + + + +**What it does** + +This tool produces an image of an input KEGG pathway, highlighting the +modules representing genes in an input list. NOTE: a given gene can +be assigned to multiple modules, and different genes can be assigned to +the same module. + +