view galaxy-tools/biobank/utils/check_tsv_header.xml @ 4:f833f23d38a3 draft

Deleted selected files

<tool id="vl_utils_check_tsv_header" name="VLU.check_tsv_header">
  <description>
    Check tsv file header
  </description>
  <command interpreter="python">
    check_tsv_header.py
    --in-file=${tsv_file}
    --loglevel=$__app__.config.vl_loglevel
    --logfile=${logfile}
  </command>
  <stdio>
    <!-- Anything other than zero is an error -->
    <exit_code range="1:" level="fatal" description="Wrong header" />
    <exit_code range=":-1" />
   </stdio>
  <inputs>
    <!-- ************************************************** -->
    <param name="tsv_file" type="data" format="tabular" label="TSV file to be checked"/>
  </inputs>

  <outputs>
    <data format="txt" name="logfile" label="${tool.name}.logfile"/>
  </outputs>
  <help>
    It will check header of a tsv file
  </help>
</tool>