Mercurial > repos > rhpvorderman > updio
comparison updio.xml @ 3:ea681f34ca41 draft default tip
planemo upload commit 6139391ea037a297a151c74a909f089c26ac77e6
| author | rhpvorderman |
|---|---|
| date | Wed, 18 Jan 2023 10:54:43 +0000 |
| parents | 264bc77bfed6 |
| children |
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| 2:264bc77bfed6 | 3:ea681f34ca41 |
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| 1 <tool id="updio" name="UPDio" version="1.1.0+galaxy1" python_template_version="3.5" profile="21.05"> | 1 <tool id="updio" name="UPDio" version="1.1.0+galaxy2" python_template_version="3.5" profile="21.05"> |
| 2 <requirements> | 2 <requirements> |
| 3 <requirement type="package" version="1.1.0">updio</requirement> | 3 <requirement type="package" version="1.1.0">updio</requirement> |
| 4 <container type="docker">quay.io/biowdl/updio:1.1.0</container> | 4 <container type="docker">quay.io/biowdl/updio:1.1.0</container> |
| 5 </requirements> | 5 </requirements> |
| 6 <command detect_errors="exit_code"><![CDATA[ | 6 <command detect_errors="exit_code"><![CDATA[ |
| 21 label="Mother sample ID in the VCF file" /> | 21 label="Mother sample ID in the VCF file" /> |
| 22 <param name="dad_id" type="text" | 22 <param name="dad_id" type="text" |
| 23 label="Father sample ID in the VCF file" /> | 23 label="Father sample ID in the VCF file" /> |
| 24 </inputs> | 24 </inputs> |
| 25 <outputs> | 25 <outputs> |
| 26 <data format="tsv" name="updio_table" label="${tool.name} on ${on_string}: table"/> | 26 <data format="tsv" name="updio_table" label="${tool.name} on ${child_id}: table"/> |
| 27 <data format="tsv" name="updio_verdict" label="${tool.name} on ${on_string}: verdict"/> | 27 <data format="tsv" name="updio_verdict" label="${tool.name} on ${child_id}: verdict"/> |
| 28 </outputs> | 28 </outputs> |
| 29 <help><![CDATA[ | 29 <help><![CDATA[ |
| 30 UPDio is designed to detect UPD events in probands from vcf trio data. | 30 UPDio is designed to detect UPD events in probands from vcf trio data. |
| 31 ]]></help> | 31 ]]></help> |
| 32 </tool> | 32 </tool> |
