Mercurial > repos > rhpvorderman > data_manager_select_index_by_path

annotate tool-data/gene_transfer.loc.sample @ 32:f33444a00082 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit fe7f241c6a14c4a836368a8a555b91555c26d642
author rhpvorderman
date Thu, 05 Jul 2018 04:55:20 -0400
parents afd01fcbea26
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
3
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
1 #This file lists the locations and dbkeys of all the gene transfer files
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
2
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
3 #This file has the format (white space characters are TAB characters):
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
4 #
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
5 #<unique_build_id> <dbkey> <display_name> <file_path>
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
6 #
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
7 #So, gene_transfer.loc could look something like this:
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
8 #
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
9 #vm5 vm5 vM5 annotation /path/to/vM5.annotation.gtf
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
10 #
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
11 #Your gene_transfer.loc file should contain an entry for each individual
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
12 #gtf file.
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
13 #
afd01fcbea26 planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit 5db36ba46db15647fd3206c23114b7671e4b4f79
rhpvorderman
parents:
diff changeset
14