Mercurial > repos > remimarenco > regtools_junctions_extract
comparison tool_dependencies.xml @ 5:b19712698167 draft default tip
planemo upload commit 7f110d46c04f7f69aa7b61af0d3eb86e15fd14c6-dirty
| author | remimarenco |
|---|---|
| date | Fri, 22 Jul 2016 16:50:54 -0400 |
| parents | ce43595f430d |
| children |
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| 4:ce43595f430d | 5:b19712698167 |
|---|---|
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="regtools" version="0.3.0"> | 3 <package name="regtools" version="0.3.0"> |
| 4 <install version="1.0"> | 4 <install version="1.0"> |
| 5 <actions> | 5 <actions> |
| 6 <action type="shell_command">git clone --recursive https://github.com/griffithlab/regtools.git</action> | 6 <action type="shell_command">git clone --recursive https://github.com/griffithlab/regtools.git</action> |
| 7 <action type="change_directory">regtools</action> | |
| 8 <action type="make_directory">build</action> | 7 <action type="make_directory">build</action> |
| 9 <action type="change_directory">build</action> | 8 <action type="change_directory">build</action> |
| 10 | 9 |
| 11 <action type="set_environment_for_install"> | 10 <action type="set_environment_for_install"> |
| 12 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 11 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 13 <package name="cmake" version="3.2.3" /> | 12 <package name="cmake" version="3.2.3" /> |
| 14 </repository> | 13 </repository> |
| 15 </action> | 14 </action> |
| 16 <action type="shell_command">cmake ..</action> | 15 <action type="shell_command">cmake ..</action> |
| 17 | 16 |
| 18 <action type="shell_command">build</action> | 17 <action type="shell_command">make</action> |
| 19 <action type="move_file"> | 18 <action type="move_file"> |
| 20 <source>regtools</source> | 19 <source>regtools</source> |
| 21 <destination>$INSTALL_DIR</destination> | 20 <destination>$INSTALL_DIR</destination> |
| 22 </action> | 21 </action> |
| 23 <action type="set_environment"> | 22 <action type="set_environment"> |