# HG changeset patch
# User refinery-platform
# Date 1512400593 18000
# Node ID 2c6b2c6ee3bb4a7e13437a92efa22fbec5f3b6f1
# Parent  a01e30f7777f50d1a246768d5390d852871e4390
planemo upload for repository https://github.com/scottx611x/picard_MergeSamFiles commit 2137a21daebbb1cf755e8bf99fae7f5a77b07f87-dirty

diff -r a01e30f7777f -r 2c6b2c6ee3bb picard_MergeSamFiles.xml
--- a/picard_MergeSamFiles.xml	Mon Dec 04 10:11:59 2017 -0500
+++ b/picard_MergeSamFiles.xml	Mon Dec 04 10:16:33 2017 -0500
@@ -3,12 +3,11 @@
   <macros>
     <import>picard_macros.xml</import>
   </macros>
-  <expand macro="requirements" />
   <command detect_errors="exit_code"><![CDATA[
     @java_options@
     #for $index, $listCollection in enumerate($inputList):
       && 
-      picard
+      java -jar \$JAVA_JAR_PATH/picard.jar 
       MergeSamFiles
 
       #for $element in $listCollection: