Mercurial > repos > refinery-platform > fastqc_workflow
comparison Galaxy-Workflow-FastQC.ga @ 0:f7c3063d580a draft default tip
Initial upload
| author | refinery-platform |
|---|---|
| date | Thu, 13 Aug 2015 13:57:03 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:f7c3063d580a |
|---|---|
| 1 { | |
| 2 "a_galaxy_workflow": "true", | |
| 3 "annotation": "{\"refinery_type\": \"analysis\"}", | |
| 4 "format-version": "0.1", | |
| 5 "name": "FastQC", | |
| 6 "steps": { | |
| 7 "0": { | |
| 8 "annotation": "", | |
| 9 "id": 0, | |
| 10 "input_connections": {}, | |
| 11 "inputs": [ | |
| 12 { | |
| 13 "description": "", | |
| 14 "name": "Input Dataset" | |
| 15 } | |
| 16 ], | |
| 17 "name": "Input dataset", | |
| 18 "outputs": [], | |
| 19 "position": { | |
| 20 "left": 155, | |
| 21 "top": 389 | |
| 22 }, | |
| 23 "tool_errors": null, | |
| 24 "tool_id": null, | |
| 25 "tool_state": "{\"name\": \"Input Dataset\"}", | |
| 26 "tool_version": null, | |
| 27 "type": "data_input", | |
| 28 "user_outputs": [] | |
| 29 }, | |
| 30 "1": { | |
| 31 "annotation": "{\"html_file\": {\"name\": \"fastqc_report\", \"description\": \"HTML file containing FASTQC report.\", \"type\": \"html\"}, \"text_file\": {\"name\": \"fastqc_results\", \"description\": \"Data file containing FASTQC results.\", \"type\": \"txt\"}}", | |
| 32 "id": 1, | |
| 33 "input_connections": { | |
| 34 "input_file": { | |
| 35 "id": 0, | |
| 36 "output_name": "output" | |
| 37 } | |
| 38 }, | |
| 39 "inputs": [], | |
| 40 "name": "FastQC", | |
| 41 "outputs": [ | |
| 42 { | |
| 43 "name": "html_file", | |
| 44 "type": "html" | |
| 45 }, | |
| 46 { | |
| 47 "name": "text_file", | |
| 48 "type": "txt" | |
| 49 } | |
| 50 ], | |
| 51 "position": { | |
| 52 "left": 464, | |
| 53 "top": 346 | |
| 54 }, | |
| 55 "post_job_actions": {}, | |
| 56 "tool_errors": null, | |
| 57 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.63", | |
| 58 "tool_state": "{\"__page__\": 0, \"contaminants\": \"null\", \"__rerun_remap_job_id__\": null, \"limits\": \"null\", \"input_file\": \"null\"}", | |
| 59 "tool_version": "0.63", | |
| 60 "type": "tool", | |
| 61 "user_outputs": [] | |
| 62 } | |
| 63 } | |
| 64 } |
