# HG changeset patch
# User recetox
# Date 1621242519 0
# Node ID 2877bbac4c8232d524d352316c4db096256586b5
# Parent  a1439454fe7fcb318566acda7c08ad5f4af34da5
"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/aplcms commit ffadabe63b4a1428918cb80dc1f8598f41a458bd"

diff -r a1439454fe7f -r 2877bbac4c82 aplcms_macros.xml
--- a/aplcms_macros.xml	Mon Apr 19 12:27:32 2021 +0000
+++ b/aplcms_macros.xml	Mon May 17 09:08:39 2021 +0000
@@ -102,7 +102,7 @@
                    help="The retention time tolerance level for peak alignment. The default is NA, which allows the program to search for the tolerance level based on the data." />
             <param name="align_mz_tol" type="float" optional="true"
                    label="align_mz_tol (optional)"
-                   help="The m/z tolerance level for peak alignment. The default is NA, which allows the program to search for the tolerance level based on the data. This value is expressed as the percentage of the m/z value. This value, multiplied by the m/z value, becomes the cutoff level." />
+                   help="The m/z tolerance level for peak alignment. The default is NA, which allows the program to search for the tolerance level based on the data. The tolerance is given in absolute numbers, not scaled, i.e. for 10ppm tolerance enter '1e-05'. This value, multiplied by the m/z value, becomes the cutoff level." />
             <param name="max_align_mz_diff" type="float" value="0.01"
                    label="max_align_mz_diff"
                    help="As the m/z tolerance is expressed in relative terms (ppm), it may not be suitable when the m/z range is wide. This parameter limits the tolerance in absolute terms. It mostly influences feature matching in higher m/z range." />