# HG changeset patch
# User public-health-bioinformatics
# Date 1666895591 0
# Node ID d848d37efb0c672ab654c5da6f3e5b63d417ff6a
# Parent  caeae8f3792c894a20a2067ca7d8759e83965a84
planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/adjust_bracken_for_unclassified_reads commit 24535690aedb81353cf5e036dc4577022d9604ad

diff -r caeae8f3792c -r d848d37efb0c adjust_bracken_kreport_for_unclassified_reads.py
--- a/adjust_bracken_kreport_for_unclassified_reads.py	Thu Oct 27 18:11:07 2022 +0000
+++ b/adjust_bracken_kreport_for_unclassified_reads.py	Thu Oct 27 18:33:11 2022 +0000
@@ -49,7 +49,7 @@
     writer = csv.DictWriter(sys.stdout, fieldnames=output_fieldnames, dialect='excel-tab')
 
     bracken_unclassified_entry = {
-        'percentage': '{:.3f}'.format(kraken_report_unclassified_seqs / total_seqs * 100),
+        'percentage': '{:.2f}'.format(kraken_report_unclassified_seqs / total_seqs * 100),
         'seqs_total': kraken_report_unclassified_seqs,
         'seqs_this_level': kraken_report_unclassified_seqs,
         'taxonomic_level': 'U',
@@ -58,7 +58,7 @@
     }
 
     for row in kraken_style_bracken_report:
-        row['percentage'] = '{:.3f}'.format(row['seqs_total'] / total_seqs * 100)
+        row['percentage'] = '{:.2f}'.format(row['seqs_total'] / total_seqs * 100)
 
     kraken_style_bracken_report_with_unclassified = [bracken_unclassified_entry] + kraken_style_bracken_report
     for row in kraken_style_bracken_report_with_unclassified: