Mercurial > repos > prog > lcmsmatching

diff search-mz @ 5:18254e8d1b72 draft

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planemo upload for repository https://github.com/workflow4metabolomics/lcmsmatching.git commit 947b8707b06176a4801de64a71c8771617311ffb-dirty
author prog
date Thu, 16 Mar 2017 08:15:11 -0400
parents 1ba222315fd5
children b8f70d8216b3
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--- a/search-mz	Thu Mar 16 05:05:55 2017 -0400
+++ b/search-mz	Thu Mar 16 08:15:11 2017 -0400
@@ -530,7 +530,7 @@
 
 # Set columns 'all-cols' specified
 if ( ! is.null(opt[['all-cols']]))
-	opt$rtcol <- db$getChromCol()
+	opt$rtcol <- db$getChromCol()[['id']]
 
 # Check chrom columns
 if ( ! is.null(opt[['check-cols']]) && ! is.null(opt$rtcol)) {