comparison lcmsmatching.xml @ 7:882f2f20028b draft

planemo upload for repository https://github.com/workflow4metabolomics/lcmsmatching.git commit 608d9e59a0d2dcf85a037968ddb2c61137fb9bce

6:b8f70d8216b3

<tool id="lcmsmatching" name="LC/MS matching" version="3.3.0" profile="16.01">

	<description>Annotation of MS peaks using matching on a spectra database.</description>

	<requirements>
		<!--<requirement type="package" version="3.3.3">r</requirement>-->

			<when value="peakforest">
				<param name="dburl" type="text" size="128" value="https://peakforest-alpha.inra.fr/rest" refresh_on_change="true"/>

				<param name="dbtoken" label="Peakforest security token" type="text" size="32" value="" refresh_on_change="true" help="If you do not have yet a Peakforest token, go to Peakforest website and request one from your account."/>

				<param name="dbfields" type="text" size="32" value="" hidden="true"/>
			</when>
		</conditional>

		<!-- INPUT -->

7:882f2f20028b

<tool id="lcmsmatching" name="LC/MS matching" version="3.3.1" profile="16.01">

	<description>Annotation of MS peaks using matching on a spectra database.</description>

	<requirements>
		<!--<requirement type="package" version="3.3.3">r</requirement>-->

			<when value="peakforest">
				<param name="dburl" type="text" size="128" value="https://peakforest-alpha.inra.fr/rest" refresh_on_change="true"/>

				<param name="dbtoken" label="Peakforest security token" type="text" size="32" value="" refresh_on_change="true" help="If you do not have yet a Peakforest token, go to Peakforest website and request one from your account."/>

				<param name="dbchromcolfield" type="text" size="32" value="" hidden="true"/>
			</when>
		</conditional>

		<!-- INPUT -->