# HG changeset patch
# User pjbriggs
# Date 1520245993 18000
# Node ID 86bedbd3c5c28594b9d496a3103d266ce249b67f
# Parent 3c9479ab24c3b5903f779106210d166329e5cb8c
Uploaded version 0.36.5 (use conda to resolve dependencies)
diff -r 3c9479ab24c3 -r 86bedbd3c5c2 README.rst
--- a/README.rst Mon Aug 21 04:58:40 2017 -0400
+++ b/README.rst Mon Mar 05 05:33:13 2018 -0500
@@ -71,6 +71,8 @@
========== ======================================================================
Version Changes
---------- ----------------------------------------------------------------------
+0.36.5 - Remove tool_dependencies.xml and always use conda to resolve tool
+ dependencies
0.36.4 - Add option to provide custom adapter sequences for ILLUMINACLIP
- Add options ``minAdapterLength`` and ``keepBothReads`` for ILLUMINACLIP
in palindrome mode
diff -r 3c9479ab24c3 -r 86bedbd3c5c2 tool_dependencies.xml
--- a/tool_dependencies.xml Mon Aug 21 04:58:40 2017 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,27 +0,0 @@
-
-
-
-
-
- http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.36.zip
-
-
- $INSTALL_DIR
-
-
- adapters
- $INSTALL_DIR/adapters
-
-
- $INSTALL_DIR
-
-
- $INSTALL_DIR/adapters
-
-
-
- Trimmomatic requires the Java Runtime Environment
-
-
-
-
diff -r 3c9479ab24c3 -r 86bedbd3c5c2 trimmomatic.xml
--- a/trimmomatic.xml Mon Aug 21 04:58:40 2017 -0400
+++ b/trimmomatic.xml Mon Mar 05 05:33:13 2018 -0500
@@ -1,4 +1,4 @@
-
+
flexible read trimming tool for Illumina NGS data
trimmomatic_macros.xml