# HG changeset patch
# User pjbriggs
# Date 1500908667 14400
# Node ID 84613d5f1713b08090a6a85d9476d596eb45bebd
# Parent  e95e2b7b3c84a11636619bac9281916af0f2ff89
Uploaded fix to printing read IDs with associated with 'bad' ranges.

diff -r e95e2b7b3c84 -r 84613d5f1713 pal_finder_wrapper.sh
--- a/pal_finder_wrapper.sh	Fri Jun 16 09:30:37 2017 -0400
+++ b/pal_finder_wrapper.sh	Mon Jul 24 11:04:27 2017 -0400
@@ -320,7 +320,7 @@
 
 Pal_finder generated bad ranges for the following read IDs:
 EOF
-    $(find_bad_primer_ranges Output/pr3in.txt) >&2
+    echo $(find_bad_primer_ranges Output/pr3in.txt) >&2
     cat >&2 <<EOF
 
 This error can occur when input data contains short R1 reads and has
diff -r e95e2b7b3c84 -r 84613d5f1713 pal_finder_wrapper.xml
--- a/pal_finder_wrapper.xml	Fri Jun 16 09:30:37 2017 -0400
+++ b/pal_finder_wrapper.xml	Mon Jul 24 11:04:27 2017 -0400
@@ -1,4 +1,4 @@
-<tool id="microsat_pal_finder" name="pal_finder" version="0.02.04.5">
+<tool id="microsat_pal_finder" name="pal_finder" version="0.02.04.6">
   <description>Find microsatellite repeat elements from sequencing reads and design PCR primers to amplify them</description>
   <requirements>
     <requirement type="package" version="5.16.3">perl</requirement>