Mercurial > repos > pjbriggs > data_manager_mothur_toolsuite
diff README.markdown @ 0:b90e0f2bf4b1 draft default tip
Initial version.
author | pjbriggs |
---|---|
date | Tue, 18 Nov 2014 09:57:33 -0500 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.markdown Tue Nov 18 09:57:33 2014 -0500 @@ -0,0 +1,27 @@ +data_manager_mothur_reference_data +================================== + +Data manager to install reference data for Mothur toolsuite. + +Specifically it can download data directly from the Mothur website, or +import files and directories on the server filesystem. + +This tool needs a version of the mothur toolsuite that has been switched to +use data tables, and should be installed into a Galaxy instance from a +toolshed (you can use the `package_mothur_data_manager.sh` script to create +a .tgz file suitable for upload to a toolshed). + +Note that Galaxy's support for data managers is generally still quite limited, +so it is possible that this tool may produce unexpected results. It also only +possible to add entries to the data tables i.e. edit or delete functionality +is not available via the tool. + +Changes +------- + +0.1.1: extended to allow import of multiple files from server + filesystem in a single operation. + +0.1.0: added function to import single file from server filesystem. + +0.0.1: initial version with download from Mothur website option. \ No newline at end of file