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Renamed from "ceasbw..." to "ceas...".
author pjbriggs
date Wed, 22 Apr 2015 05:34:06 -0400
parents 8b25779ee261
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2:695d61decd06 3:82df5af2995f
1 CEASbw 1 CEAS
2 ====== 2 ====
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4 XML and wrapper script for the Cistrome version of the CEAS package, which can be 4 XML and wrapper script for the CEAS package, which can be used to annotate intervals
5 used to annotate intervals and scores with genome features. 5 and scores with genome features.
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7 In addition to the `ceas` program, the Cistrome version of the package includes the 7 This tool uses the Cistrome version of the package, which provides two versions of
8 `ceasBW` program which can handle 8 the `ceas` program: in addition to the `ceas` program (the same as that available
9 from the main CEAS website), it also includes the `ceasBW` program (which can handle
10 bigwig input).
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10 The tool assumes that the `ceas` and `ceasBW` programs are on the Galaxy user's 12 The tool assumes that the `ceas` and `ceasBW` programs are on the Galaxy user's
11 path. The official CEAS website is at 13 path.
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15 The official CEAS website is at:
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13 <http://liulab.dfci.harvard.edu/CEAS/index.html> 17 <http://liulab.dfci.harvard.edu/CEAS/index.html>
14 18
15 the Cistrome version can be found via 19 The Cistrome version can be found via
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17 <https://bitbucket.org/cistrome/cistrome-applications-harvard/overview> 21 <https://bitbucket.org/cistrome/cistrome-applications-harvard/overview>
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19 To add to Galaxy add the following to tool_conf.xml: 23 To add to Galaxy add the following to tool_conf.xml:
20 24