# HG changeset patch # User pjbriggs # Date 1576573933 0 # Node ID 1bc0077b2c91ecd794d82b3b68559129593b5df4 # Parent 8d5fe964f61f228dc0d2055aab32bdd8ce6b7411 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 06b2cc0d518a6a4d77b865b6567e0bc6a2fb26df-dirty diff -r 8d5fe964f61f -r 1bc0077b2c91 amplicon_analysis_pipeline.py --- a/amplicon_analysis_pipeline.py Wed Dec 11 13:59:48 2019 +0000 +++ b/amplicon_analysis_pipeline.py Tue Dec 17 09:12:13 2019 +0000 @@ -317,7 +317,9 @@ for pdf in sorted(glob.glob( os.path.join(error_rate_plots_dir,"*.pdf")))] - with open("error_rate_plots.html","w") as error_rate_plots_out: + error_rate_plots_html = os.path.join(error_rate_plots_dir, + "error_rate_plots.html") + with open(error_rate_plots_html,"w") as error_rate_plots_out: error_rate_plots_out.write(""" Amplicon analysis pipeline: DADA2 Error Rate Plots