Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

diff install_tool_deps.sh @ 4:013bf1e2cc8f draft

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Updated to Amplicon_Analysis_pipeline v1.2.2.
author pjbriggs
date Wed, 13 Jun 2018 07:43:57 -0400
parents b9e2b3dd392d
children
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line diff
--- a/install_tool_deps.sh	Wed Apr 25 03:50:53 2018 -0400
+++ b/install_tool_deps.sh	Wed Jun 13 07:43:57 2018 -0400
@@ -35,6 +35,9 @@
     rm -rf $wd/*
     rmdir $wd
 }
+function install_amplicon_analysis_pipeline_1_2_2() {
+    install_amplicon_analysis_pipeline $1 1.2.2
+}
 function install_amplicon_analysis_pipeline_1_2_1() {
     install_amplicon_analysis_pipeline $1 1.2.1
 }
@@ -689,7 +692,7 @@
     mkdir -p $TOP_DIR
 fi
 # Install dependencies
-install_amplicon_analysis_pipeline_1_2_1 $TOP_DIR
+install_amplicon_analysis_pipeline_1_2_2 $TOP_DIR
 install_cutadapt_1_11 $TOP_DIR
 install_sickle_1_33 $TOP_DIR
 install_bioawk_27_08_2013 $TOP_DIR