comparison amplicon_analysis_pipeline.py @ 12:fb2af52d67d1 draft

planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 53544cd620f81c5cfbdcb277e835f1c6da8588b0-dirty
author pjbriggs
date Mon, 18 Jun 2018 07:54:54 -0400
parents 570228bb2fb7
children c87b166cbfe1
comparison
equal deleted inserted replaced
11:570228bb2fb7 12:fb2af52d67d1
97 fp.close() 97 fp.close()
98 98
99 def find_executable(name): 99 def find_executable(name):
100 # Locate executable on PATH 100 # Locate executable on PATH
101 for p in os.environ['PATH'].split(os.pathsep): 101 for p in os.environ['PATH'].split(os.pathsep):
102 exe = os.path.join(name) 102 exe = os.path.join(p,name)
103 if os.path.isfile(exe) and os.access(exe,os.X_OK): 103 if os.path.isfile(exe) and os.access(exe,os.X_OK):
104 return exe 104 return exe
105 return None 105 return None
106 106
107 if __name__ == "__main__": 107 if __name__ == "__main__":