comparison amplicon_analysis_pipeline.py @ 9:32a43bc3dd58 draft

planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit f72ff88ee11d09703bf38524dbb8026ee14bc3ef-dirty
author pjbriggs
date Mon, 18 Jun 2018 07:17:52 -0400
parents 8292f8262a9d
children b47cf1d6fb47
comparison
equal deleted inserted replaced
8:8292f8262a9d 9:32a43bc3dd58
98 98
99 def find_executable(name): 99 def find_executable(name):
100 # Locate executable on PATH 100 # Locate executable on PATH
101 for p in os.environ['PATH'].split(os.pathsep): 101 for p in os.environ['PATH'].split(os.pathsep):
102 exe = os.path.join(name) 102 exe = os.path.join(name)
103 if os.path.isfike(exe) os.access(exe,os.X_OK): 103 if os.path.isfile(exe) and os.access(exe,os.X_OK):
104 return exe 104 return exe
105 return None 105 return None
106 106
107 if __name__ == "__main__": 107 if __name__ == "__main__":
108 # Command line 108 # Command line